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Name : dnaB (Rta_24090) Accession : YP_004619526.1 Strain : Ramlibacter tataouinensis TTB310 Genome accession: NC_015677 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 2557650 - 2559053 bp Length : 1404 bp Strand : - Note : - DNA sequence : ATGTCCGCACTCCTTTCCGCCATCGGCGACGACTTCTCCCCCGAACGCCAGGTAGCGCAGCTGCGCGTGCCGCCGCACTC CATCGAGGCCGAATCCAGCGTGCTGGGCGGTCTGCTGCTGGACAACGCCGCCTGGGACCGGGTCGGCGACCTGCTGACTG ACGGCGACTTCTACCGCTACGAACACCGGCTGATCTACGCGGCCGTCGGTGGCCTGATCAACGCCACCAAGCCGGCCGAC GTGATCACGGTCTTCGAGCAGCTGCAGAACCTGGGCAAGGCCGAGGAGGTCGGCGGCCTGGCCTACCTGAACTCGCTGGC CCAGTACGTGCCCAGCGCCGGCAACATCCGCCGTTACGCGGAGATCGTGCGCGAGCGCTCCATCCTGAGGAAGCTGGTGT CGGCTTCCGACGAGATCGCCACCAACGCCTTCAATCCGCAGGGCAAGGCGGTGGACCAGATCCTGGACGAGGCCGAGCAG AAGATCTTCAACATCGGCGAGGAAGGCTCGCGGATGAAGCAGGGCTTCCAGGCCATGGATTCCCTGGTGGTGCAGCTGCT GGACCGGGTCCAGGAGATGGCGGACAACCCGAACGACATCACGGGCGTGCCCACCGGCTTCTACGACCTGGACCGCATGA CTTCCGGCATGCAGGCCGGCGACATGATCGTGCTGGCGGCGCGCCCGTCCATGGGCAAGACGGCCTTCGCCATCAACATC GCCGAGCACGTGGCCCTCGCCGAGGGCCTGCCGGTCGCGGTGTTCTCCATGGAGATGGGCGCCTCGCAGCTGGCCGTGCG TATCGTGGGCTCCATCGGCCGCATCGACCAGGGCCACCTGCGCACTGGCAAGCTCACCGACGACGAGTGGCCGCGCCTGA CCGAGGCGATCGAGAAGCTGCGCAACGTCTCGCTGCACATCGACGAGACGCCCGGCCTCACGGTGAGCGAGCTGCGCGCC AACGCGCGCCGGCTGGCGCGCCAGTGCGGCAAGCTGGGGCTGATCGTGGTGGACTACCTGCAGCTGATGAGCGTCTCCTC GGGCATGAGCGAGGAGAACCGCGCCACCGCCGTGGGCGAGATCTCGCGCGGCCTGAAGATGCTGGCCAAGGAGCTGCAGT GCCCGGTGATCGCGCTGTCGCAGCTCTCGCGCGGGGTGGAAAGCCGCACCGACAAGCGGCCCATGATGAGCGACCTGCGG GAGTCCGGCGCCATCGAGCAGGACGCGGATGTCATCATGTTCATCTACCGCGACGACTACTACAACAAGGACTCCAAGGA GCCCGGCGTCGCCGAGATCATCATCAGCAAGCAGCGCAATGGGCCCACCGGCACCGTGAAGCTGGCCTTCCTCAAGCCGC TGACCAAGTTCGAGTCCCTGGCCGGCGGCTCCGACGACTTCTAG Protein sequence : MSALLSAIGDDFSPERQVAQLRVPPHSIEAESSVLGGLLLDNAAWDRVGDLLTDGDFYRYEHRLIYAAVGGLINATKPAD VITVFEQLQNLGKAEEVGGLAYLNSLAQYVPSAGNIRRYAEIVRERSILRKLVSASDEIATNAFNPQGKAVDQILDEAEQ KIFNIGEEGSRMKQGFQAMDSLVVQLLDRVQEMADNPNDITGVPTGFYDLDRMTSGMQAGDMIVLAARPSMGKTAFAINI AEHVALAEGLPVAVFSMEMGASQLAVRIVGSIGRIDQGHLRTGKLTDDEWPRLTEAIEKLRNVSLHIDETPGLTVSELRA NARRLARQCGKLGLIVVDYLQLMSVSSGMSEENRATAVGEISRGLKMLAKELQCPVIALSQLSRGVESRTDKRPMMSDLR ESGAIEQDADVIMFIYRDDYYNKDSKEPGVAEIIISKQRNGPTGTVKLAFLKPLTKFESLAGGSDDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-99 | 49 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-79 | 45 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 5e-84 | 45 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 9e-84 | 44 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-79 | 44 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-79 | 44 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-83 | 43 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-82 | 43 |
