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Name : Rta_19550 (Rta_19550) Accession : YP_004619066.1 Strain : Ramlibacter tataouinensis TTB310 Genome accession: NC_015677 Putative virulence/resistance : Unknown Product : oligopeptide ABC transporter ATP-binding protein with duplicated domains Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2066501 - 2068126 bp Length : 1626 bp Strand : + Note : - DNA sequence : ATGAGTGGGCGGGAGGAAGGCCTGGCCCCGCTGCTCGAGGTCAGCAACCTGCGCGTGGCCTTCGGCGGCAAGGAGGTGGT GCACGGCGTGAGCTTCGCCATCGCCCCGGGCGAGAAGCTGGCCCTGGTGGGCGAGTCCGGCTCCGGCAAGACGGTGACGG CGCTGTCGCTGCTGCGGCTGGCCCAAGGCGCTCGGCTGGGCGGTTCCGCCCGCCTTCTCGGTTCGGACCCCGCCGCCGGC AGGCGCGACCTGCTGGCGATGTCCGAGCGGGAGCTGCTGGGCGTGAGGGGCCGGGAGATCGCCATGATCTTCCAGGAGCC GATGACGGCGCTCAACCCGGTCTACACCGTGGGCGACCAGATCGCCGAGGTGCTGCGGCTCAAGCAGGGCCTGTCGGCGC GCCAGGCCTGGGACGGCGCGGTGGAGGCCCTGGCCGCCACCGGCGTGCCCGAGCCGCAGCGCCGCGCCCGGGCCTTTCCG CACCAGCTCTCCGGCGGCCAGCGCCAGCGCGCCATGATCGCCATGGCCCTGGCCTGCCGGCCGCGGCTGCTGCTGGCCGA CGAGCCCACCACCGCGCTGGACGTGACGCTGCGCCAGCAGATCCTGGAGCTGCTGGCGCAGCTGCAGCGCCAGACCGGGA TGGCCGTGCTGATGATCACGCACGACCTGAACCTGGTGCGCAAGTTCGCCGACCGGGTGGCGGTGATGGAGAACGGGCAC CTGGTGGAACACGGCGCGGTGCAGGCCGTGTTCGGCCAGCCGCGGCATCCCTACACCCGCAAGCTGATCGACAGCCGTCC GGAACGCGAGCTGCAGGAAGGCCCACCCGAGGGTGAACCGGTGATGCGGGCCCGGGAGGTGCGGGTGAGCTACCCGGTAC CGCTGGCCGGCATCCGCGGCTGGTTCCGCCGCGGCGAGTTCGTGGCGGTGCACGGGGCGGCGTTCGCCATCCCGCCGGGC CGCACCCTGGGCGTGGTGGGCGAGTCCGGCTCCGGCAAGTCCACACTGGCCCTGGCGGCCCTGGGCCTGGTGCCGCACCG GGGCACACTGGAGGTGGCGGGTGGGCACTGGCAGCGCGGCACGGCGGCCAGCCGGCCGCTGCGCCGGCAGATCCAGGTGG TGTTCCAGGACCCGTTCTCCTCCCTGTCGCCGCGCATGACCGTGGAGGAGATCGTGGGCGAGGGCCTGCTGGTGCACGAA CCCGGCCTGGACCTGGCGCAACGCCGCGAGCGGGTGGTGCGGGCGCTGGGCGACGTGGGCCTGACCGAGCAGCTCTTTCC CGGCCTGCTGGCGCGCTACCCGCACGAGTTCTCCGGCGGCCAGCGCCAGCGCCTGGCGATCGCCCGGGCGCTGATCGTGG AGCCGCGCCTGCTGGTGCTGGACGAGCCGACCAGCGCGCTGGACGTGACCATCCAGAAGCAGGTGCTGCGCCTGCTGCAG CGGCTGCAGCGCGAGCGGGGCCTGAGCTACCTGCTGATCACCCACGACATCGAGGTCATCCACGCCATGGCGCACGACGT GGTGGTGATGAAGGAGGGCCGCATCGTCGAAGCCGGCACGGCCCAGCAGGTGCTGGGCCAGCCGCAGGACCCGTACACCC AGGCGCTGATCGCGGCCGCCGTCTGA Protein sequence : MSGREEGLAPLLEVSNLRVAFGGKEVVHGVSFAIAPGEKLALVGESGSGKTVTALSLLRLAQGARLGGSARLLGSDPAAG RRDLLAMSERELLGVRGREIAMIFQEPMTALNPVYTVGDQIAEVLRLKQGLSARQAWDGAVEALAATGVPEPQRRARAFP HQLSGGQRQRAMIAMALACRPRLLLADEPTTALDVTLRQQILELLAQLQRQTGMAVLMITHDLNLVRKFADRVAVMENGH LVEHGAVQAVFGQPRHPYTRKLIDSRPERELQEGPPEGEPVMRAREVRVSYPVPLAGIRGWFRRGEFVAVHGAAFAIPPG RTLGVVGESGSGKSTLALAALGLVPHRGTLEVAGGHWQRGTAASRPLRRQIQVVFQDPFSSLSPRMTVEEIVGEGLLVHE PGLDLAQRRERVVRALGDVGLTEQLFPGLLARYPHEFSGGQRQRLAIARALIVEPRLLVLDEPTSALDVTIQKQVLRLLQ RLQRERGLSYLLITHDIEVIHAMAHDVVVMKEGRIVEAGTAQQVLGQPQDPYTQALIAAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-70 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-70 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-70 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-70 | 43 |
