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Name : Rta_19500 (Rta_19500) Accession : YP_004619061.1 Strain : Ramlibacter tataouinensis TTB310 Genome accession: NC_015677 Putative virulence/resistance : Virulence Product : arginine/lysine/ornithine decarboxylase-like protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : - Position : 2059340 - 2061604 bp Length : 2265 bp Strand : + Note : - DNA sequence : ATGAAATTCCGCTTCCCCATCGTCATCATCGACGAGGACTACCGTTCCGAGAACACCTCCGGGCTGGGCATCCGCGCCCT GGCCCAGGCGATCGAGGCCGAGGGCATGGAGGTGCTGGGGGCCACCAGCTACGGCGACCTGTCGCAGTTCGCGCAGCAGC AAAGCCGCGCCAGCGCCTTCATCCTGTCGATCGACGACGAGGAGTTCAGCTCCGGCCCGGACCCGGACCCCGTGGTGGTC AAGCTGCGCAGCTTCATCCAGGAGGTGCGCCGCAAGAACGCCGACGTGCCGATCTACATCTACGGCGAGACCAAGACCAG CCGGCACCTGCCCAACGACATCCTGCGCGAGCTGCATGGCTTCATCCACATGTACGAGGACACGCCGGAGTTCATGGCGC GCCACATCATCCGCGAGGCCAAGAGCTACCTGGAGGGCGTGCAGCCCCCGTTCTTCAAGGCGCTGCTGGACTACGCGGAG GACGGCTCCTACTCCTGGCACTGCCCGGGCCACTCCGGCGGGGTGGCCTTCCTCAAGAGCCCGATCGGCCAGATGTTCCA CCAGTTCTTCGGCGAGAACATGCTGCGCGCCGACGTGTGCAACGCGGTGGACGAGCTGGGCCAGCTGCTGGACCACACCG GCCCGGTGGCCGCCAGCGAGCGCAACGCGGCGCGCATCTTCAACGCCGACCACTGCTTCTTCGTGACCAACGGCACCTCC ACGTCCAACAAGATGGTCTGGCACCACACGGTTGCGCCGGGCGACGTGGTGGTGGTGGACCGCAACTGCCACAAGTCCAT CCTGCACTCCATCATCATGACAGGGGCCATCCCCGTGTTCATGAAGCCCACGCGCAACCACTTCGGCATCATCGGCCCGA TCCCGCAGAGTGAATTCGAGCCGGCGGCGATCAAGGCCAAGATCAAGGCCAACCCGCTGCTCCAGGGCGTGGACCCGGAC ACCGTGAAGCCGCGCGTGATGACGCTGACCCAGTCCACCTACGACGGGGTGCTGTACAACACCGAAACCATCAAGAGCAT GCTGGACGGCTACGTCGACACGCTGCACTTCGACGAGGCCTGGCTGCCGCACGCGGCCTTCCACCCGTTCTACGGCTCCT ACCACGCCATGGGCAAGCGGCGCTCGCGGCCCAAGGAGTCGCTGACCTTCGCCACCCAATCCACACACAAGCTGCTGGCA GGCATCAGCCAGGCCAGCCACGTGCTGGTGCAGGACTCGGCCAACCGCAAGCTGGACAGGCACCTGTTCAACGAGGCCTA CCTGATGCACACCTCGACCAGCCCTCAGTACAGCATCATCGCCAGCTGCGACGTGGCGGCCGCCATGATGGAGCCGCCCG GCGGCACGGCCCTGGTGGAGGAGAGCATCCTGGAGGCGCTGGACTTCCGCCGCGCCATGCGCAAGGTCGACCAGGAGTAC GGCAAGGACTGGTGGTTCAAGGTCTGGGGCCCGGACAAGCTGGCCGAGGAGGGCATAGGCCGCGCCGACGACTGGGTCAT CAAGGGCGAGGCGCGCACCGCCAAGTGGCACGGCTTCGGCAACCTGGCCGAGGGCTTCAACATGCTGGACCCGATCAAGT CCACCATCGTCACGCCCGGCCTGGACCTGAACGGCAAGTTCGCCAAGACCGGCATCCCGGCGTCCATCGTCACCCGGTTT CTGGCCGAGCACGGGATCATCGTGGAGAAGACCGGCCTGTACAGCTTCTTCATCATGTTCACCATCGGCATCACCAAGGG CCGCTGGAACACGCTGCTGACGGCGCTGCAGCAGTTCAAGGACGACTACGCGCGCAACCAGCCGATGTGGCGCATCCTGC CGGAGTTCTGCCAGGCCTACCCGCGCTACGAACGCATGGGACTGGCCGACCTGTGCCAGCACGTGCACGAGCTGTACGCC AAGTACGACATCGCGCGGCTGACCACGGAGATGTACCTGTCGGACCTGACGCCCGCCATGAAGCCCAGCGATGCCTTCGC GCACATCGCCCACCGCAAGACCGAGCGGGTGGAGATCGACCAGCTCGAAGGGCGCATCACGACCAGCCTGGTCACGCCTT ATCCGCCGGGCATCCCGCTGCTGATCCCGGGCGAGGTGTTCAACAGGAAGATCGTCGACTACCTCAAGTTCTCGCGCGAG TTCAACGCGCAGTGCCCGGGCTTCGAGACCGACATCCACGGCCTGGTGGAGGAGCTGGGCAGCGACGGCCAGCCGCGCTA CTTCGCCGACTGCGTCAAGGATTGA Protein sequence : MKFRFPIVIIDEDYRSENTSGLGIRALAQAIEAEGMEVLGATSYGDLSQFAQQQSRASAFILSIDDEEFSSGPDPDPVVV KLRSFIQEVRRKNADVPIYIYGETKTSRHLPNDILRELHGFIHMYEDTPEFMARHIIREAKSYLEGVQPPFFKALLDYAE DGSYSWHCPGHSGGVAFLKSPIGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFNADHCFFVTNGTS TSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAIPVFMKPTRNHFGIIGPIPQSEFEPAAIKAKIKANPLLQGVDPD TVKPRVMTLTQSTYDGVLYNTETIKSMLDGYVDTLHFDEAWLPHAAFHPFYGSYHAMGKRRSRPKESLTFATQSTHKLLA GISQASHVLVQDSANRKLDRHLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESILEALDFRRAMRKVDQEY GKDWWFKVWGPDKLAEEGIGRADDWVIKGEARTAKWHGFGNLAEGFNMLDPIKSTIVTPGLDLNGKFAKTGIPASIVTRF LAEHGIIVEKTGLYSFFIMFTIGITKGRWNTLLTALQQFKDDYARNQPMWRILPEFCQAYPRYERMGLADLCQHVHELYA KYDIARLTTEMYLSDLTPAMKPSDAFAHIAHRKTERVEIDQLEGRITTSLVTPYPPGIPLLIPGEVFNRKIVDYLKFSRE FNAQCPGFETDIHGLVEELGSDGQPRYFADCVKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 3e-105 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rta_19500 | YP_004619061.1 | arginine/lysine/ornithine decarboxylase-like protein | VFG1670 | Protein | 2e-105 | 42 |
