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Name : ribD (Rta_15230) Accession : YP_004618633.1 Strain : Ramlibacter tataouinensis TTB310 Genome accession: NC_015677 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis bifunctional protein ribD : Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase) Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG1985 EC number : - Position : 1593632 - 1594789 bp Length : 1158 bp Strand : - Note : - DNA sequence : ATGAGCGGTTTCGGCCGGCCCGGAAGCGATCACTCACAATGCGGTGCCATGACTGCAGCCAGCCCGGTTCTCGCCTTCCA AGCCCTGGAACTCGCCCGGCAGGCCCTGTGGCTGTCCAACCCCAACCCCCGCGTCGGCTGCATCCTGTGCGCCCCGGCCG GCCGCATCCTGGGCCAGGGCCACACCCAGCAGGCCGGCGGTCCGCATGCCGAGGTCATGGCGCTGCGCGACGCCGCGGCG CGGGGCCATGACGTGCGCGGCGCGACGGCTTATGTCACGCTGGAGCCCTGCTCGCACCACGGCCGCACCGGCCCCTGCTG CGACGCCCTGATCCAGGCCGGCATCGCCCGGGTGGTCGCCTCCATCGCCGACCCCAACCCGCTGGTCTCGGGCCGGGGTT TCGAGCGGCTGCGCGCCGCCGGTGTCCAGGTGGAGGTCGGCGCGGGCGCGGCCGGATCGCGCGAGCTCAATATCGGCTTC TTCAGCCGCATGGTCCGCCAGACGCCCTGGGTGCGGCTGAAGGTCGCGGCTTCCCTGGACGGCACCACGGCGCTGGACAA CGGTGCCAGCCAGTGGATCACCTCGGAAGCGGCCCGCACCGACGGGCATGCCTGGCGAGCGCGCGCCTGCGCCGTGCTCA CCGGCATCGGCACCGTGCTGGAAGACGATCCCCAATTGGACGTGCGCCTGGTGCAGGCGCCGCGCCAGCCCCATGCGGTG CTGGTGGACAGCCGCCTGGAGCTGCCGCTGACGGCGCGCCTGCTGCGGCCGGGCCGCAAGCTGCTGGTGTATGCGGCGGT TGCCGACGCGGCGAAACGGGCGGCCCTGGAGGCGCGGGGCGCCACGGTCATCCTGCTGCCCGGCCCCGGCGGCAAGGTCG ACCTGCCCGCCATGCTGCGCGACCTGGCGCGGCGGGAGGTGAACGAGCTGCACGTGGAAGCCGGCCACAAGCTCAACGGC TCGCTGGTGCGCGAAGGGCTGGTGGACGAGTTCCTGGTGTACCTGGCGCCCAAGCTGCTCGGGCCCGGCCGCGGCATGGC CGCCCTGGCGCCGCTGGGCGAGCTGTCGAAGGCGGTGCCGCTGCAGTTCACGTCCACCGAGGCCGTGGGGCCCGACCTGC GCATCCTGGCCCGCATCCCCGGCCGCGACGCGTTCTAG Protein sequence : MSGFGRPGSDHSQCGAMTAASPVLAFQALELARQALWLSNPNPRVGCILCAPAGRILGQGHTQQAGGPHAEVMALRDAAA RGHDVRGATAYVTLEPCSHHGRTGPCCDALIQAGIARVVASIADPNPLVSGRGFERLRAAGVQVEVGAGAAGSRELNIGF FSRMVRQTPWVRLKVAASLDGTTALDNGASQWITSEAARTDGHAWRARACAVLTGIGTVLEDDPQLDVRLVQAPRQPHAV LVDSRLELPLTARLLRPGRKLLVYAAVADAAKRAALEARGATVILLPGPGGKVDLPAMLRDLARREVNELHVEAGHKLNG SLVREGLVDEFLVYLAPKLLGPGRGMAALAPLGELSKAVPLQFTSTEAVGPDLRILARIPGRDAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 7e-47 | 41 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 7e-47 | 41 |
