Gene Information

Name : gspG (Rta_12620)
Accession : YP_004618370.1
Strain : Ramlibacter tataouinensis TTB310
Genome accession: NC_015677
Putative virulence/resistance : Virulence
Product : pseudopilin, general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 1307259 - 1307711 bp
Length : 453 bp
Strand : -
Note : -

DNA sequence :
ATGCAGATGATCATGAAATCGCTGGGGCGACCAGTAGCATCCTGGGTACGCGGCTTCACGTTGCTCGAGCTACTGGTCGT
CATCGTGATCATTGGCCTCATCTCAGGTCTCGTCCTGCCTCGGTACTTCGACACCGTAGGCAAGTCCAAGGCAAAGGTCG
CAAAGGCTCAGATGACTGCTCTGGAGAGGGCGCTCGAGCAGTACCGACTGGACGTCGGCGCCTTTCCGACCAATGAGCAG
GGCCTGCAGGCTCTGATGGTCCGGCCTGCAGGCGCGCAGAGATGGGAAGGCCCGTATCTCAAGAAAGCTGTTCCCGAAGA
CCCCTGGGGCAACGCCTATGTCTACAAGGTAGCACCTTCGATGAAGGACATCGAGCTCACCTCTTTGGGTTCTGACGGGC
GTCCAGGCGGCGAGGGAGATGCTAAGGATGTTTCCCTGTCCGACAAGGACTAG

Protein sequence :
MQMIMKSLGRPVASWVRGFTLLELLVVIVIIGLISGLVLPRYFDTVGKSKAKVAKAQMTALERALEQYRLDVGAFPTNEQ
GLQALMVRPAGAQRWEGPYLKKAVPEDPWGNAYVYKVAPSMKDIELTSLGSDGRPGGEGDAKDVSLSDKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-13 43
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_004618370.1 pseudopilin, general secretion pathway protein G VFG2050 Protein 7e-14 43