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Name : gabD (Rta_11430) Accession : YP_004618247.1 Strain : Ramlibacter tataouinensis TTB310 Genome accession: NC_015677 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NADP+) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1177467 - 1178906 bp Length : 1440 bp Strand : + Note : - DNA sequence : ATGACCTATCCCAGCACCCAGCTCTTCATCAACGGCCAGTGGCAGGACGCGGCGGACGGCCGCACGCTGGCGGTGTTCAA CCCGGCGACGGGCAAGGAGATCGGCCGCGTGGCCCATGCGTCCAAGGCCGACCTGGACCAGGCGCTGGCCGCCGCGCAGA AGGGTTTCGAGACCTGGCGCGACATGACCGCCGCCGACCGCAGCAAGGTCATGCGCAAGGCCGCCGGCTTCATGCGCGAG CGCGCCGAGGCCATCGGCCGCCTGCTGACGCAGGAGCAGGGCAAGCCGCTGGCCGAGGCCAAGGGCGAGGCCCTGGCCGC GGCCGACATCATCGAGTGGTTCGCCGAGGAGGGCTTCCGCGTCTACGGCCGCATCGTGCCCTCGCGCTGGAACCTGTCGG TGCGGCAGATGGTGGTGAAGGACCCGGTGGGCCCGGTGGCCGCGTTCACGCCCTGGAACTTCCCGATCAACCAGGTGGTG CGCAAGGTGGGCGCGGCCCTGGCCGCCGGCTGCTCCATGCTGGTCAAGGCGCCGGAGGAGACGCCCGCCGGCCCGGCCGA GCTGATCCGCGCCTTCCAGGACGCCGGCCTGCCGCCCGGGGTGCTGGGCCTGGTCTACGGCAACCCGGCCGAGATCTCCA GCTACCTGATCCCGCATCCCGTGATCCGCAAGATCACCTTCACCGGCTCCACGCCGGTGGGCAAGCAGCTGGCCGCGATG GCTGGCCAGCACATGAAGCGCGTGACCATGGAGCTGGGCGGCCATGCGCCGGTGATCGTCTGCGAGGACGCCGACATCGC GCTCGCGGCCAAGTCCGCGGGCAGCGCCAAGTTCCGCAACGCCGGCCAGGTGTGCATCTCGCCCACGCGCTTCCTGGTGC ACGAGAGCGTCAAGAAGGAGTTCGCCAGCGCGCTGGCGCAGCAGGCCCAGAAGCTCAAGGTGGGCGACGGCCTGGCCGAG GGCACGCAGATGGGCCCGCTGGCCAACCCGCGCCGCCTGACCGCCATGGCCGAGTTCACCAAGGACGCCGTGGCCAAGGG CGCCACCGTGCTGGCCGGCGGCGAGCGCATCGGCGATGCCGGCAACTTCTGGCAGCCCACCATCCTGGCCGACGTGCCGG TGGAGGCCAAGGTGTTCAACGACGAGCCCTTCGGCCCCATGGCCGCCATCCGCAGCTTCAACACGCTGGACGAGGCCATC GCCGAGTCCAACCGCCTGCCCTACGGCCTGGCCGGCTATGCGTTCACCAAGTCGCTGAAGAACGCCGACCTGCTGGCGCG GCGAGTCGAGGTCGGCATGCTGTGGGTCAACATGCCGGCCATGCCCTCGGCCGAGCTGCCCTTCGGCGGCGTCAAGGACT CGGGTTATGGCTCCGAAGGCGGCCCCGAGGCGCTGGAGGCCTACCTCAACACCCGCGCGGTCAGCGTGGCGAACGTCTGA Protein sequence : MTYPSTQLFINGQWQDAADGRTLAVFNPATGKEIGRVAHASKADLDQALAAAQKGFETWRDMTAADRSKVMRKAAGFMRE RAEAIGRLLTQEQGKPLAEAKGEALAAADIIEWFAEEGFRVYGRIVPSRWNLSVRQMVVKDPVGPVAAFTPWNFPINQVV RKVGAALAAGCSMLVKAPEETPAGPAELIRAFQDAGLPPGVLGLVYGNPAEISSYLIPHPVIRKITFTGSTPVGKQLAAM AGQHMKRVTMELGGHAPVIVCEDADIALAAKSAGSAKFRNAGQVCISPTRFLVHESVKKEFASALAQQAQKLKVGDGLAE GTQMGPLANPRRLTAMAEFTKDAVAKGATVLAGGERIGDAGNFWQPTILADVPVEAKVFNDEPFGPMAAIRSFNTLDEAI AESNRLPYGLAGYAFTKSLKNADLLARRVEVGMLWVNMPAMPSAELPFGGVKDSGYGSEGGPEALEAYLNTRAVSVANV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-69 | 42 |
