Gene Information

Name : Mesop_0918 (Mesop_0918)
Accession : YP_004609502.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 973306 - 973989 bp
Length : 684 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: mlo:mlr4457 two-component response regulator; PFAM: response regulator receiver; transcriptional regulat

DNA sequence : 
ATGCGACTTCTGCTTGTCGAGGACGACCACAGGACGGCCGACTACATCGTCAGGGGGCTGACGGAGGCCGGGCATGTCTG
CGACCTGCTGCGCAACGGCCACGACGCGCTGTTCGCGGCGACCAGCGGCACCTACGACGTGATCGTGGCCGACCGGATGA
TCCCCGGTCTCGACGGCTTGTCCCTGGTCAAGGCGATCCGCGCGGCGGGGGTACGCACGCCGGCGATCTTCCTCACCTCC
GTCGGCGGCATCGACGACCGCGTCGAGGGGCTGGAAGCCGGCGGCGACGACTATCTGGTCAAGCCCTTCGCCTTTTCCGA
GCTGCTCGCCCGCATCAACGCGCTCGGACGCCGTCCGGCGGCTCAGGAACAGAAGACGGTTCTGCGGGTCGCCGACCTCG
AGATGGACCTGATCATGCGGCGCGTCGTCAGGCAGGGCCGGCCGATCGACCTGCAGCCGCGCGAATTCAGCCTGCTGGAG
GTGCTGATGCGCGGCGAGGGCCGCGTCATCACCCGCACCATGCTTCTGGAGCGCGTCTGGGATTTCCATTTCGACCCCAG
GACCAGCGTCGTCGAGACCCATATCAGCCGGCTGCGAGCCAAGATCGACAAGCCGTTCGAGACCCAGCTCATCCATACCG
TCCGCAACACCGGCTACAGCCTGCACGCATCGCCTTCGCCATGA

Protein sequence : 
MRLLLVEDDHRTADYIVRGLTEAGHVCDLLRNGHDALFAATSGTYDVIVADRMIPGLDGLSLVKAIRAAGVRTPAIFLTS
VGGIDDRVEGLEAGGDDYLVKPFAFSELLARINALGRRPAAQEQKTVLRVADLEMDLIMRRVVRQGRPIDLQPREFSLLE
VLMRGEGRVITRTMLLERVWDFHFDPRTSVVETHISRLRAKIDKPFETQLIHTVRNTGYSLHASPSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-44 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-43 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_0918 YP_004609502.1 winged helix family two component transcriptional regulator BAC0125 Protein 1e-50 50
Mesop_0918 YP_004609502.1 winged helix family two component transcriptional regulator BAC0638 Protein 1e-46 50
Mesop_0918 YP_004609502.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-51 49
Mesop_0918 YP_004609502.1 winged helix family two component transcriptional regulator BAC0111 Protein 1e-51 47
Mesop_0918 YP_004609502.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-48 47
Mesop_0918 YP_004609502.1 winged helix family two component transcriptional regulator BAC0308 Protein 2e-48 46
Mesop_0918 YP_004609502.1 winged helix family two component transcriptional regulator BAC0347 Protein 1e-44 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_0918 YP_004609502.1 winged helix family two component transcriptional regulator VFG0596 Protein 3e-44 45
Mesop_0918 YP_004609502.1 winged helix family two component transcriptional regulator VFG1389 Protein 1e-31 44
Mesop_0918 YP_004609502.1 winged helix family two component transcriptional regulator VFG1390 Protein 5e-38 41