Gene Information

Name : Mesop_0889 (Mesop_0889)
Accession : YP_004609473.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 939456 - 940637 bp
Length : 1182 bp
Strand : +
Note : COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: mlo:mll4503 cystathionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Cystathionine gamma-lyase; PFAM: Cys/Met metabolism

DNA sequence : 
ATGACCAGCCATACCCCACCAGCGGGCAAAAACCGCCTGGCTTTTTCGACGCGCACGATCCATGGCGGCCAGCGCCACGA
TCCGCTGACAGGTGCCGTGATGGTGCCGATCTACGCCACCTCGACCTATGGCCAGCAGTCGCCCGGCGTGCACAAGGGCT
TTGAATATGCCCGCAGCCAGAACCCGACGCGCTTTGCCTTCGAGCGCGCCGTGGCCGACCTCGAAAGCGGCTCGGCGGCT
TTCGCCTTCGCCTCCGGGCTGGCCTCGATCGCCACCGTGCTGGAGCTGCTCGACAGCGGCGCGCATATCGTCGCCACCGA
CGACATCTATGGCGGTTCCTTCCGGCTGATGGAGCGGGTGCGCAAGCGCTCTGCCGGCCTGCAGGTCTCGTTCGTCGATT
TCACCGATCTTGCGGCGGTGGAGGCCGCGATCCGGCCGGAGACCAAGATGCTCTGGGTCGAGACGCCGACCAATCCGCTG
CTGCGCATCGTCGACCTCGAAGGCGTCGCCGCACTTGCCAAGCGCAAGGGCATCCTGTCGGTCGCCGACAATACGTTTTG
CAGCCCCTATATCCAGCGGCCGCTGGAACTCGGCATCGACATCGTGGTCCATTCGACGACCAAATATCTCAACGGCCATT
CCGACATGGTCGGTGGCGCCGCCGTCGTCGGCGACAACAAGGAGCTGGCCGCCCAGCTGAAATTCCTGCAGAACGCCATC
GGCGCCATATCGGGTCCGTTCGACAGCTTCCTGGCGCTGCGCGGCCTGAAGACACTGGCGCTCAGGATGGAGCGTCATTC
CGACAACGGGCTGAAGATCGCGCAGTGGCTGGAAGCCCGCAAGGACATACGCCGCGTCATCTATCCCGGCCTCGCCAGCC
ACCCGCAGCACGCCATCGCCGTCCAGCAGATGTACGCCTTCGGCGGCATGATCACCGTCGTGCTCGACCGCGATCTTGCC
GGGACAAAACGCTTCCTCGAACGCACGCAATTGTTCACGCTGGCCGAAAGCCTCGGCGGGGTCGAGAGCCTGATCGAACA
CCCGGCGCTGATGACGCACGGGTCCATTCCCGCCGAGAAGCGGGTCGAGATCGGCATATCGGATTCGTTGGTGCGGCTGT
CGGCGGGGATCGAGGATGGCGATGATCTGATCGCCGATCTGGATCAGGCGCTGGGGGGATAG

Protein sequence : 
MTSHTPPAGKNRLAFSTRTIHGGQRHDPLTGAVMVPIYATSTYGQQSPGVHKGFEYARSQNPTRFAFERAVADLESGSAA
FAFASGLASIATVLELLDSGAHIVATDDIYGGSFRLMERVRKRSAGLQVSFVDFTDLAAVEAAIRPETKMLWVETPTNPL
LRIVDLEGVAALAKRKGILSVADNTFCSPYIQRPLELGIDIVVHSTTKYLNGHSDMVGGAAVVGDNKELAAQLKFLQNAI
GAISGPFDSFLALRGLKTLALRMERHSDNGLKIAQWLEARKDIRRVIYPGLASHPQHAIAVQQMYAFGGMITVVLDRDLA
GTKRFLERTQLFTLAESLGGVESLIEHPALMTHGSIPAEKRVEIGISDSLVRLSAGIEDGDDLIADLDQALGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-77 50
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-78 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 8e-59 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_0889 YP_004609473.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 1e-62 43