Gene Information

Name : Mesop_0679 (Mesop_0679)
Accession : YP_004609267.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 715291 - 717078 bp
Length : 1788 bp
Strand : -
Note : COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR017871:IPR013563:IPR003593; KEGG: rsk:RSKD131_3429 ABC transporter related precursor; PFAM: ABC transporter related; Oligopeptide/dipept

DNA sequence :
ATGACCTCAAACCCCGAAATAATCCTCGACATCGCCAATCTCTCGGTCAGCGTGCGCGGCGAGGATGGCGAGCGCGACGT
CGTCTCCAACCTGTCGCTGACGCTTTCGCGGGGCGAGACGCTGTGCATTGCCGGCGAATCCGGCTCCGGCAAATCGATGA
CCGCGCTGGCGATCATGCAGCTTTTGCCACAGCCTGCCGCGCGCATAGCGTCAGGCAAAATCCGGCTTCGTGGAGGGGAT
ATGGGCGACACCGATCTTGCAACCCTCGACGAGCGCCAGATGCGCCGCATTCGTGGCGACCGCATCGCCATGATTTTCCA
GGAGCCGATGACCTCGCTCAACCCGGTGCTGTCGATCGGCCGGCAGCTCACCGAATCCATCGAGGCGCACACCAGCCTGT
CGCAGGCCGAGGCCCGCCAGCGCGCCGTCGAGGCGCTGAAGGCGGTGCGCATTTCGGAAGCCGAAAGCCGGCTAAAGCAA
TTTCCGCACGAGCTCTCCGGCGGCATGCGGCAGCGGGTGATGATCGCCATGGCGCTGGCGCTCGAGCCCGACGTGCTTAT
CGCCGACGAGCCGACGACGGCACTCGACGTCACCGTGCAGGGCGAGGTGCTGGAACTGCTGCGCGACCTGCAGCGACAGC
ATGGCACCAGCGTCATCCTGATCACCCACGACATGGGCGTGGTCGCCGAAATGGCCGACCGCGTCATCATCATGCGGCAT
GGCCGCATGGTCGAGGAGGGCAAGACATCGGACATCTTCGCCCGCCCGCAAGCCGACTACACGCGCGAGCTGCTCGCCGC
CGTGCCGCGCATCGGCAGCGGTATCGGCCGCCAGCAATCCAGGGATGTCGAGGTGGCGAAGCCGGCCGACGTCGCTGTGG
TCAACGACCTGCATGTCCGCTTCGATTTGCGCGGCGGGTTCTTCGGCCAGGTCACCCGTCGCGTTCATGCCGTCGAGGGC
GTCAGCTTCTCGATCGCGCCCAACGAGACGCTGGCGCTGGTCGGCGAATCCGGCTGCGGCAAGTCGACCACCGCCAAGGC
GCTGGCCGGGCTGGTGCCGTACAGCGGCGACATCGTCATTGGCGGGCGCAATCTGTCGGGCTTAGGCCGCGACGAGCGCA
AGGCGGTGCGCCGCGACGTGCAGATGATCTTCCAGGATCCCTTCGCCTCGCTCGATCCGCGCATGCGTGTCGGCGATCTC
GTCGCCGAGCCTCTTGTCATCCACGGCATAGCTTCGAAGGAAGAACGCCTGGACCGTGTGGCGGCGCTGTTCGAGCGCGT
CGGCCTGTCATCAGATCAGATGGAGCTCTACCCGCATGAATTCTCGGGCGGCCAGCGCCAGCGTGTCTGCATTGCCCGGG
CGCTCGCCTTGCGACCGAAACTGATCGTCGCCGACGAAAGCGTCTCGGCGCTCGACGTCTCGGTGCAGGCGCGTGTGCTC
GACTTGTTGAAGGAGTTGCAGCGCGAATTCGGCGTCGCCTATCTCTTCATCTCGCACGACATGGCGGTGGTCGAGAATAT
CTCCGACCGCGTCGCCGTCATGTATCTCGGCCAGATCGTCGAAATGGGTACGCGCGACCAGGTCTTTTCCAACCCGCGCC
ACCCCTACACGAAACGGCTGATCGAAGCCGTGCCGGTGCCCGACCCGGCGCAGCGCAGAAGCCGCTTCGCCCGCCTCGAC
CAGGAAATCCCGAGCGCGACCCGCAAGATCGGCGAGGCGCCACGAAAACTGATCCTGAGCGACGTCGGTGGCGGACATCT
TGTTGCCGCCGGAAGTTCGGATCGGTGA

Protein sequence :
MTSNPEIILDIANLSVSVRGEDGERDVVSNLSLTLSRGETLCIAGESGSGKSMTALAIMQLLPQPAARIASGKIRLRGGD
MGDTDLATLDERQMRRIRGDRIAMIFQEPMTSLNPVLSIGRQLTESIEAHTSLSQAEARQRAVEALKAVRISEAESRLKQ
FPHELSGGMRQRVMIAMALALEPDVLIADEPTTALDVTVQGEVLELLRDLQRQHGTSVILITHDMGVVAEMADRVIIMRH
GRMVEEGKTSDIFARPQADYTRELLAAVPRIGSGIGRQQSRDVEVAKPADVAVVNDLHVRFDLRGGFFGQVTRRVHAVEG
VSFSIAPNETLALVGESGCGKSTTAKALAGLVPYSGDIVIGGRNLSGLGRDERKAVRRDVQMIFQDPFASLDPRMRVGDL
VAEPLVIHGIASKEERLDRVAALFERVGLSSDQMELYPHEFSGGQRQRVCIARALALRPKLIVADESVSALDVSVQARVL
DLLKELQREFGVAYLFISHDMAVVENISDRVAVMYLGQIVEMGTRDQVFSNPRHPYTKRLIEAVPVPDPAQRRSRFARLD
QEIPSATRKIGEAPRKLILSDVGGGHLVAAGSSDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-102 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-81 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-81 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-81 41
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-81 41