Gene Information

Name : Mesop_5815 (Mesop_5815)
Accession : YP_004614317.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 5958099 - 5959847 bp
Length : 1749 bp
Strand : +
Note : COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR003593:IPR017871; KEGG: mlo:mll7244 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide

DNA sequence :
ATGAGCCCCTTGCTGTCGGTATCGGACCTGCGCGTCGGCTTCGGCCGCGATCCGCAAGCCAACGAAGTGGTGCGCGGCGT
CAGCTTCGATCTCGCCGACGGCGAGACGCTGGCCATTGTCGGGGAAAGCGGCTCGGGCAAATCCGTCACCGCATTATCGA
TCAATCGGCTTATCGATTTCGGCGGCGGTCGTATCACTGGCGGCAGCATGACGCTGAAGCGCGCCGGCGGCGGCCTCTTC
GACCTGATGGGCGCCACCGAGCCGCAGCTGACCCGCATTCGCGGCGCCGAGATCGGCATGATCTTCCAGGAGCCGATGAC
CTCGCTCAATCCGGTGCTGACCATCGGTTCGCAGATCGAGGAATCGTTTCGCCTGCATCGCGGCCTGACCGGTCGGCAAG
CCACGGCCGCGGCCAGAGATGCGCTCGACCGCGTGCGCATTCCCGATGCGGCACGGCGGCTGAAATACACGCCCAACCAG
CTGTCGGGCGGCATGCTGCAGCGGGTGATGATCGCCATTGCGCTGGCCTGCAATCCGCGCCTGCTCATCGCCGACGAGCC
GACGACCGCGCTCGATGTCACCGTGCAGGCGCAGATCATGGCGCTGCTGGCCGAGCTGAAGCGCGAGACCGGCATGTCGA
TGATCTTCATCACCCACGACATCGGCCTGGTTGCCGGCATTGCCGACAAGGTGATGGTGATGCAGAACGGACAGGCCGTC
GAACAGGGCGAGCTGAACCAGATCCTCGACAGGCCGCAGCATCCTTACACGCAGCATCTGCTGCAGGACGTGCCGCATTT
CACCAATGGCAGGGCGACACGTGCCGACGGACAGCGCAAGGAGAATGCAAGCGCAGAACCGGCCCTGAAGGTCGACGGTC
TTGTCGTGCGGTTTCCGCTCAAGAGCAATTTCTTCAGCCGCGCCACCGGCGCGGTGCACGCCGTCGACGGCGTCGACTTC
GACCTGATGCCGGGCGAGACGCTGGCGATTGTCGGCGAGAGCGGCTCGGGCAAGTCGACCACGGCAAAGGCGGTCCTTGG
GCTGGTACGTTCCACGCGTGGCAGCTTCTCAGTTCGCGCCCAAATGCCCTCGGCGGAGCACAGCGCGAAGCCCGTGCAGA
TGGTGTTCCAGAACCCCTACGCTTCGCTCAACCCAAGGCTGACCATCGAGAGCATCCTGGCCGAGCCGGTGATCGCCACC
AGCGGTCGCGTGAATGCCGAAGCCCGAACCAGGATGGCGAACCTGCTGGAACGCGTCGGCCTGCCAAAAAACAGCCTGGG
GCGCTATCCGCATGAATTCTCCGGCGGCCAGCGGCAAAGGCTGTGCATAGCACGCGCGCTGATGCTCAACCCTTCCGTCG
TCGTTCTCGACGAAGCGGTGTCGGCGCTGGACGTTTCGGTGCAGGCCAAGGTGCTGGAACTGCTGGTCGACCTGCAGCGC
GAGTTCGGGCTCGCCTATCTGTTCATCTCGCACGACATGGCGGTCGTCGAGCGGATTGCTCACCGCATCGCCGTCATCTA
TGCCGGCCAGATCGTCGAGATCGGCGACGCGGCGTCGGTGCTGGCAAGGCCGAAGCATTCCTATACGAAAAAGCTGATCG
CCGCGGTTCCGACGATCGCGCGGCGGCGTGAGCATTTCGATCTCGACACGCGGCAGGTTCCCTCGCTGGTGCGCCCGCAA
GGGTTCGAGCCGGCGCCGGCGCGATGGGAGGAGTTTGGCGGGGATCATCGAGCGAGGGTGGAAGGATGA

Protein sequence :
MSPLLSVSDLRVGFGRDPQANEVVRGVSFDLADGETLAIVGESGSGKSVTALSINRLIDFGGGRITGGSMTLKRAGGGLF
DLMGATEPQLTRIRGAEIGMIFQEPMTSLNPVLTIGSQIEESFRLHRGLTGRQATAAARDALDRVRIPDAARRLKYTPNQ
LSGGMLQRVMIAIALACNPRLLIADEPTTALDVTVQAQIMALLAELKRETGMSMIFITHDIGLVAGIADKVMVMQNGQAV
EQGELNQILDRPQHPYTQHLLQDVPHFTNGRATRADGQRKENASAEPALKVDGLVVRFPLKSNFFSRATGAVHAVDGVDF
DLMPGETLAIVGESGSGKSTTAKAVLGLVRSTRGSFSVRAQMPSAEHSAKPVQMVFQNPYASLNPRLTIESILAEPVIAT
SGRVNAEARTRMANLLERVGLPKNSLGRYPHEFSGGQRQRLCIARALMLNPSVVVLDEAVSALDVSVQAKVLELLVDLQR
EFGLAYLFISHDMAVVERIAHRIAVIYAGQIVEIGDAASVLARPKHSYTKKLIAAVPTIARRREHFDLDTRQVPSLVRPQ
GFEPAPARWEEFGGDHRARVEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 8e-78 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-78 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-78 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-78 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-99 42