Gene Information

Name : Mesop_5442 (Mesop_5442)
Accession : YP_004613952.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 5553479 - 5555098 bp
Length : 1620 bp
Strand : -
Note : COGs: COG4172 ABC-type uncharacterized transport system duplicated ATPase component; InterPro IPR017871:IPR003439:IPR013563:IPR003593; KEGG: mlo:mlr7600 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transp

DNA sequence :
ATGGCTGCTGCCGAAACCATCCTCAGCGTCAAGGACCTGCGCGTCCGTTTCCGCACGCTCGACGGCGCCGTCGAAGCGGT
GAAGGGCATCAACATCCACGTCAATGCGGGCGAGACCGTTGCCGTGGTCGGCGAATCCGGCTCCGGCAAGAGCCAGACGA
TGATGGCGGCGATGAGCCTGCTGGCCTCCAACGGCGAAGCATCGGGCAGTGTCGATTATCGCGGCCGCAACCTCCTGGCA
CTGAGCAAGTCCGAGCTGAACAAGGTCCGCGGCCGCAAGATCAGCATGATCTTCCAGGAGCCGATGACCTCGCTCGATCC
GCTTTATTCGATCGGCAACCAGCTGATCGAACCGATCCGCCGGCATCGCGGATTGAATGCCGCCGAGGCGCATGAGGAGG
CGCTCAAGCTGCTGCGGCTGGTGCATATTCCGGATCCGGAGCGGCGGATGAAATCCTATCCGCACGAAATGTCCGGCGGC
CAGCGCCAGCGCGTGATGATCGCCATGGCGCTCGCCAATGACCCCGACATCCTGATCGCCGACGAGCCGACGACGGCGCT
CGACGTGACCATCCAGGCGCAGATCCTGATGCTTCTGGCCGAGCTGCAGCGCAAGCTCGGCATGGCGATCGTCTTCATCA
CCCACGATCTTGGCATCGTCCGGCGCTTCGCCGACCGGGTCTATGTCATGCGCCGGGGCGAGGTCGTCGAAGAGGGTGAG
GCGGAAGCGATCTTCGTCGACCCGCAGCACGCCTATACCAAGATGCTGCTGGCGGCCGAGCCGACCGGAACCAAGGCGCC
ACCGCCCGCCAAGGCGCCCGTGGTGCTCGAAGGCAGGAATGTCGAAGTCACGTTCAGGATCGGCGGCGGCTTCCTCGCCG
GCGAACCGTTGATGCTGCGCGCCGTCGACGACATTTCGATACGGCTGCAGCGCAACCAGACAATCGGCATTGTTGGCGAA
TCCGGCTCGGGAAAATCCACGCTCGGCCGCGCTTTGCTGCGGCTGTTGCCGAGCGACGGGCTCATTCGTTTCGGCGATCG
CGACATTTCCACCGCCGACCGGCAGGCGATGCGGCCGCTGCGGCGCCAGATGCAACTGGTCTTCCAGGATCCGTTCGGCT
CGCTGTCGCCGCGCATGACCGTCGGCCAGGTCATCACCGAAGGGCTGCTGGTGCATGAGCCTGATCTTTCGGGCAAGCAG
CGCGACCAGCGCGCGGTCGAAGCCCTGCGCGAAGTCGGCCTCGATCCAAACGCGCGCAATCGCTACCCGCATGAATTCTC
CGGTGGGCAACGGCAGCGCATCGCCATTGCCCGCGCCATGATCCTGAAACCCAAGATGGTCGTGCTCGACGAGCCGACCT
CGGCGCTCGACCGCTCGGTGCAAAAACAAATCGTCGAACTGTTGCGCAAGCTGCAGGCCGACCACGAACTGTCCTACCTG
TTCATCAGCCACGACCTTGCCGTTGTGCGCGCCATGGCCGACTACATCATCGTCATGAAGCAGGGCAAGATCGTCGAGGA
AGGGCCGACCGAGGCGATCTTCAGCAATCCGCAGGCTGCCTATACCCAAACGCTGATGAATGCGGCAATCGATGTCACGC
GGTTCCGGTTGAGCGCCTGA

Protein sequence :
MAAAETILSVKDLRVRFRTLDGAVEAVKGINIHVNAGETVAVVGESGSGKSQTMMAAMSLLASNGEASGSVDYRGRNLLA
LSKSELNKVRGRKISMIFQEPMTSLDPLYSIGNQLIEPIRRHRGLNAAEAHEEALKLLRLVHIPDPERRMKSYPHEMSGG
QRQRVMIAMALANDPDILIADEPTTALDVTIQAQILMLLAELQRKLGMAIVFITHDLGIVRRFADRVYVMRRGEVVEEGE
AEAIFVDPQHAYTKMLLAAEPTGTKAPPPAKAPVVLEGRNVEVTFRIGGGFLAGEPLMLRAVDDISIRLQRNQTIGIVGE
SGSGKSTLGRALLRLLPSDGLIRFGDRDISTADRQAMRPLRRQMQLVFQDPFGSLSPRMTVGQVITEGLLVHEPDLSGKQ
RDQRAVEALREVGLDPNARNRYPHEFSGGQRQRIAIARAMILKPKMVVLDEPTSALDRSVQKQIVELLRKLQADHELSYL
FISHDLAVVRAMADYIIVMKQGKIVEEGPTEAIFSNPQAAYTQTLMNAAIDVTRFRLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-78 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-78 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-78 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-78 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-93 42