Gene Information

Name : Mesop_5434 (Mesop_5434)
Accession : YP_004613944.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 5545382 - 5546845 bp
Length : 1464 bp
Strand : +
Note : COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR011264:IPR016160:IPR015590; KEGG: mlo:mll7608 betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Betaine aldehyde dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; PFAM

DNA sequence :
ATGCGCGCCCAGCCCACGGCATCGCACTATGTCAACGGACGCTACGTTGACGACGAGCAAGGCGCGCCACTGCCGGTCAT
CTATCCGGCCACCGGTGAGACCATCGCCATGCTGCGCGCGGCGACGCCGAACGTGCTTGAGTTGGCTATCGAGGCCGCAC
GGGCAGCACAACCCGCCTGGGCACGGCTGAAGCCGGTCGAGCGCGGCCGCATCCTGCGCCGCGCCGCCGACATTTTGCGC
GCCCGCAACGCCGACCTTGCCCGCATCGAGACGCTCGACACCGGCAAGGCGATCCAGGAAACGCTGGTAGCGGACGCGCC
TTCAGCAGCCGATTGCCTTGAATATTTCGGCAGCGCGGTCGCCGCCTACAATGGCGAATCCGTTGACCTCGGCGGCCCCT
TCGCCTATACGCGGCGCGAGGCCCTCGGCGTCTGCGTCGGCATCGGCGCCTGGAATTATCCGATCCAGATCGCCGGCTGG
AAGTCCGCGCCCGCACTCGCCATGGGCAATGCCATGGTGTTCAAGCCATCGGAAAACACACCGCTGTCGGCGCTGGCGCT
GGCCGAGATCTACAGCGAGGCCGGCCTGCCCGACGGGCTGTTCAACGTCGTGCAGGGTTATGGCGATGTCGGCGCAGGCC
TCGTCGGCCACGATGTCGTCGCCAAGGTTTCGGTGACCGGCTCGGTGCCGACCGGCCGCAAGGTGCTGGCGCTTGCCGGC
TCCAAGATGAAGCACGCGACGATGGAGCTCGGCGGCAAGTCGCCGCTGATCGTCTTCGACGACGCCGACATCGAAAACGC
CGTTGGCGGTGCCATGCTCGGCAATTTCTATTCCACCGGCCAGATCTGCTCCAACGGCACGCGCGTCTTCGTGCAGAGCG
GCATTCACGACCGCTTTGTCGAAAGGCTGGTCGAGCGGACCAAGAAAATCCGTATCGGCGATCCACTCGATCCCGAGACC
CAGATGGGGCCGCTGGTCTCGAAAGCGCAGCATGAGAAGGTTGTCGGCTATATCGGCACCGGCAAGCAGGATGGCGCCAC
GCTGGCTTGCGGCGGCAACGTGCCTTCGCTGCAAGGTTTCGATGGCGGCTTCTTCGTCGAGCCGACCGTGTTCACCGGCG
TCACCGACACCATGCGCATCGCCCGGGAGGAGATTTTCGGACCTGTCATGAGCGTGCTGAAGTTCGACGGCGAGGACGAG
GTGATCGACCGCGCCAACGATACCGAATTCGGCCTTGCCGCCGGCGTGTTCACCCGCGACCTGCCGCGCGCCCACCGCGT
CATCTCCGAGCTGCAGGCGGGCACCTGCTGGATCAATGCCTACAATCTGACGCCAGTCGAAATCCCGTTCGGCGGCTTCA
AGCAGTCCGGCATAGGGCGGGAAAATTCGCTGGCGGCGCTGGCACTCTACTCGCAGCTGAAATCGGTCTATGTCGAGACG
GGGGACGTGGCGGCGCCTTATTGA

Protein sequence :
MRAQPTASHYVNGRYVDDEQGAPLPVIYPATGETIAMLRAATPNVLELAIEAARAAQPAWARLKPVERGRILRRAADILR
ARNADLARIETLDTGKAIQETLVADAPSAADCLEYFGSAVAAYNGESVDLGGPFAYTRREALGVCVGIGAWNYPIQIAGW
KSAPALAMGNAMVFKPSENTPLSALALAEIYSEAGLPDGLFNVVQGYGDVGAGLVGHDVVAKVSVTGSVPTGRKVLALAG
SKMKHATMELGGKSPLIVFDDADIENAVGGAMLGNFYSTGQICSNGTRVFVQSGIHDRFVERLVERTKKIRIGDPLDPET
QMGPLVSKAQHEKVVGYIGTGKQDGATLACGGNVPSLQGFDGGFFVEPTVFTGVTDTMRIAREEIFGPVMSVLKFDGEDE
VIDRANDTEFGLAAGVFTRDLPRAHRVISELQAGTCWINAYNLTPVEIPFGGFKQSGIGRENSLAALALYSQLKSVYVET
GDVAAPY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-68 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-69 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-73 41
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 4e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_5434 YP_004613944.1 betaine aldehyde dehydrogenase VFG0082 Protein 2e-73 41