Gene Information

Name : Mesop_4853 (Mesop_4853)
Accession : YP_004613367.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4963288 - 4964058 bp
Length : 771 bp
Strand : +
Note : COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347:IPR002198; KEGG: mlo:mll8564 3-ketoacyl-acyl carrier protein reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-

DNA sequence : 
ATGACCGGACGACTGAAAGACAAGGTGGCGCTGATCATCGGCAGCGCGCGCGGCATCGGCAAGGGCATCGCGCAGCGTTT
CGCCGAGGAAGGCGCAAGGCTGGTGCTCGCCGATACCGAGGCGGCGGCCGGCCAAGCGACCGCCAGCGAACTCGGCGTGC
CCTTCATCCGCACCGATATCTCGCGGATGAGCGACGCCGAGGCCGCGGTGGCTCTGGCGCTGAAGCAGCACGGCCGCCTC
GACATCATCGTGCAGAATGCCGGCATCTATCCCTGGCAATTGATCGAGAACACGAGCGCCGACGACTGGGACCGCGTCAT
GGCCGTCAATCTGCGCGGCACCTTCAATGCCAGCCGCGCCGCACTGGTGCCGATGAAGGCGCAGCGTTTTGGCCGCATGC
TCTACACCTCCTCCATAACCGGTCCGCACGTGACCAGCCCGGGCCACGGCCACTATTCGGCCAGCAAGGCCGGAATCAAC
GGCTTCATCCGGGCGGCGGCGCTGGAATTCTCCGGCTATGGCATCACCGTCAACGGCGTCGAGCCCGGCAACATCCTGAC
CGAAGCCATCCAGCAGCATCGCGGCGCCGCCTACATCAAGAACATGGAGGATTCCATCCCGCTCGGCAGGCTCGGCAGCC
CGCGCGACGTCGCCAACGCCTTCCTGTTCCTCGCCTCGGATGACGCCAGCTACATCACCGGCACGACCATCGTCGTCGAT
GGCGGACAATTGCTGCCCGAGGGCAATGACTTTCGGCTGCTGCCGCCGTGA

Protein sequence : 
MTGRLKDKVALIIGSARGIGKGIAQRFAEEGARLVLADTEAAAGQATASELGVPFIRTDISRMSDAEAAVALALKQHGRL
DIIVQNAGIYPWQLIENTSADDWDRVMAVNLRGTFNASRAALVPMKAQRFGRMLYTSSITGPHVTSPGHGHYSASKAGIN
GFIRAAALEFSGYGITVNGVEPGNILTEAIQQHRGAAYIKNMEDSIPLGRLGSPRDVANAFLFLASDDASYITGTTIVVD
GGQLLPEGNDFRLLPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-24 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 8e-25 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-24 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-24 41