Gene Information

Name : Mesop_3894 (Mesop_3894)
Accession : YP_004612426.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 3993003 - 3994625 bp
Length : 1623 bp
Strand : -
Note : COGs: COG4172 ABC-type uncharacterized transport system duplicated ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: mlo:mlr1190 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter rel

DNA sequence :
ATGAGCCTGCTGGAGATCGAGAACCTGTCGCTCGCCATCGGCGACACGCCGATCCTGAAAGGCGTGGAACTCTCCCTTGC
ATCAGGCGAAGTCATGGGGCTGGTCGGCGAATCCGGCTCCGGCAAATCGATGACCGCGCTGACGGTGATGCGGCTTCTGC
CCCACGCCGCGCGCGCCACAGGGCGCGTCACCTTCGATGGGATAAATATCCTCGCCGCAACGGAGGACCAGATGTGCGCG
CTGCGCGGCGACGACATCGGCATGGTGTTCCAGGAGCCGATGACCGCTCTCAACCCGGTCAAGACCATCGGAGAACAGGT
AGCCGAAGGCATACGCTGGCACACCAGGACCACACGCGCGGAAGCTGAGGAGCGGGCGCGAAAAATGCTAGACCGCGTCG
GCCTTCCCTCGGCAAAATTCCCACTGTCGCGCTATCCGCACGAGCTGTCCGGCGGCCAGCGCCAGCGCGTCGTCATTGCC
ATCGCCTGTGCGCTGAGGCCGAAGCTGCTGATCGCCGACGAACCGACAACGGCCCTCGACGTGGTGCTGCAGGCGCAAAT
CCTCGACCTCCTGCGCGATCTGGTGGCGGAGAGCCGCATGGGCCTGCTGCTGATCTCGCACGACCTCGCCGTGGTGACCG
AGATGGCCGACCGCATCACCATCCTGCGCCATGGTGAGGTGATGGAGGCCGGCGACACGGTGCGCACGCTGTCCGAACAG
CTCCACCCCTATACGCGCCAGCTGGCGCAAGCCTCCATGCATGTGCCGGCGCGCGCCAAGCCGCATGGCGCTGGAACAGG
CAAGCCCTTGCTTCAGGTCGAGAACGTGACCCGTGACTATGCCGGCCGGCGCGCCGCGCTGTTCAGGCGCGCGCCCGACA
TCCGCGCCGTCGACGATGTCTCCCTGTCGATGGCGCCGGGTCAATCGATGGCGCTGGTCGGCCGCTCCGGCTGCGGCAAG
TCAACGCTCGCCCGGATGATCTTGGCACTGGACCGGCCAAGCGCCGGCACGATCCGGTTTCGCGGCGACACCATCACCGG
CAAGCGCGAAGCAGAGCTGAAGCCGGCGCGACGCGACATGCAGGTTGTCTTCCAGGATCCCTATGGCTCCTTCGATCCGC
GCCAGAAGGTGGAAAGGCTGGTCGCCGAGCCGCTGCATGTGCTGGAGAAGAAACCGACCCGCGCCGAGCGCCGCGAAATG
GTGGCGCATGCGCTGCACGAGGTTGGCCTCGATCAACGCGACATGGACAAGTACCCACACGAATTTTCGGGCGGCCAGCG
CCAGCGCCTGTCGATCGCGCGCGCCATCATCACCCGCCCCAAGCTGGTCGTCGCCGACGAGCCGGTCTCGGCGCTCGACG
TCTCGATCCGCGCCCAGATCCTCGATCTGTTCGCCGAACTCAACCAGAAGCTCGGCATCGCCTACCTCTTCATCACCCAC
GATCTGACCGTCGCCCGAGCCATCACCGACGAGGTGCTGGTCATGCATGACGGCAAGATCGTCGAGCGCGGCAGGACGAA
CGAGGTGCTCGATCATCCGCAATCCGAGGCCGCCAGGGCGCTGGTTGCCGCCGCCCCGGACCTGCACAGGGCAATCGCGC
GCCGGATGCAGGAGCAAGGTTAA

Protein sequence :
MSLLEIENLSLAIGDTPILKGVELSLASGEVMGLVGESGSGKSMTALTVMRLLPHAARATGRVTFDGINILAATEDQMCA
LRGDDIGMVFQEPMTALNPVKTIGEQVAEGIRWHTRTTRAEAEERARKMLDRVGLPSAKFPLSRYPHELSGGQRQRVVIA
IACALRPKLLIADEPTTALDVVLQAQILDLLRDLVAESRMGLLLISHDLAVVTEMADRITILRHGEVMEAGDTVRTLSEQ
LHPYTRQLAQASMHVPARAKPHGAGTGKPLLQVENVTRDYAGRRAALFRRAPDIRAVDDVSLSMAPGQSMALVGRSGCGK
STLARMILALDRPSAGTIRFRGDTITGKREAELKPARRDMQVVFQDPYGSFDPRQKVERLVAEPLHVLEKKPTRAERREM
VAHALHEVGLDQRDMDKYPHEFSGGQRQRLSIARAIITRPKLVVADEPVSALDVSIRAQILDLFAELNQKLGIAYLFITH
DLTVARAITDEVLVMHDGKIVERGRTNEVLDHPQSEAARALVAAAPDLHRAIARRMQEQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-83 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-83 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-83 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-83 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-93 42