Gene Information

Name : Mesop_3784 (Mesop_3784)
Accession : YP_004612319.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3876683 - 3877462 bp
Length : 780 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: mlo:mlr1334 two-component response regulator; PFAM: response regulator receiver; transcriptional regulat

DNA sequence : 
ATGCCAACACATGGTGCAATGCAGGCTGCGGCAAACCGGATCGATTTGAACGCAGAGTTCAAATCGCCGAGGCAAGGGTC
GCATGTCCTCATTGTCGAAGACGATGTCGAGATCGCGCGTATGCTGGGCGAGACGCTCACCGAAAACGGCATGATCGTGG
AAATCGCCGGCAACGGCGCCCGGATGAACGCCGCGCTTCTCAACCAGAAATTCGACCTGATCGTGCTCGATATCATGCTG
CCTGGTGAAAACGGCCTCAGCATCTGCCGCCGTCTTCGCGCGCACACGAATGTTCCGCTCCTGATGCTGACGGCGCTTGG
CGAGGAAATCGACCGCATCTTCGGACTGGAGATCGGCGCCGACGACTATGTGACGAAACCGTTCAGCGCGCGCGAGCTGA
CGGCAAGGATACGGGCGTTGCTGCGCCGCACGGCCTACGCTCCCGACGAGCGGGACCGATCGAAAGTGCTTCGCTTCAAC
GGCTGGCGCCTCGATCCCGTTCGCCGGCAATTGCATGATCCAAGCAATGCGCGGGTTGCGACCACGACGCACGAATTCGA
TCTGTTGCTTGCGTTCTGCCGCAATCCAGGCCGGGTTCTGTCGCGCGAGGAACTTCTCAGCGTAACCCATGCCGGACTTG
CCGGCCCGATCGAGCGAAGCGTCGATGTCCATGTCAGCCGGATCCGCCAGAAGATCGAAAAGGACGCGCGCGATCCGGTG
CTTCTGAGGACCGTACGGCTGGGCGGCTACATCTTCACCGCGACTGTGGAGGAAGCGTGA

Protein sequence : 
MPTHGAMQAAANRIDLNAEFKSPRQGSHVLIVEDDVEIARMLGETLTENGMIVEIAGNGARMNAALLNQKFDLIVLDIML
PGENGLSICRRLRAHTNVPLLMLTALGEEIDRIFGLEIGADDYVTKPFSARELTARIRALLRRTAYAPDERDRSKVLRFN
GWRLDPVRRQLHDPSNARVATTTHEFDLLLAFCRNPGRVLSREELLSVTHAGLAGPIERSVDVHVSRIRQKIEKDARDPV
LLRTVRLGGYIFTATVEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_3784 YP_004612319.1 winged helix family two component transcriptional regulator NC_008702.1.4607594. Protein 2e-44 47
Mesop_3784 YP_004612319.1 winged helix family two component transcriptional regulator BAC0347 Protein 5e-21 41
Mesop_3784 YP_004612319.1 winged helix family two component transcriptional regulator BAC0111 Protein 7e-21 41
Mesop_3784 YP_004612319.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 4e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_3784 YP_004612319.1 winged helix family two component transcriptional regulator VFG1563 Protein 1e-25 41