Gene Information

Name : Mesop_2015 (Mesop_2015)
Accession : YP_004610589.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 2095111 - 2096511 bp
Length : 1401 bp
Strand : -
Note : COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR003593:IPR005714:IPR000194; KEGG: mlo:mlr2909 flagellum-specific ATP synthase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase;

DNA sequence :
ATGTCGCTCCAACAGCCATCCATCCGCGCACCCGAGAGACAGCCGCAGCCGGCGCCGGAAGACCGCCTGGCCGCGCTCGA
GCGTGTATGGCGCCGCTTCAGCGGCGCCGACGCGCTGGTCAAGCGTGGCGGCCTCGTCACCGAAGTTACGCCCACGCACT
ACAAGGTGCGCGGCCTTTCCGATTTCGCTCGGTTGGGCGACATCGTCGAGCAGCGCGGCCTGGCCGGCGCGCGCCGCGGC
GAAATCGTCAAGATCAGCCGCGACGAGGTTGTCGTAGCCCCCTTCGAACGCAGTGCCGATGCCGGTATCGGCGATGCCGT
CTTCCGCCGCGGCCCGCTCGCCGTGGCTCCGCACGGCTCGTGGCGCGGCCGCACCATAGATGCGCTGACCCGGGCGATCG
ACGGAGGCCCGCCGCTCGTCAGGGGTGACGACATGGCGGCCAGCGCCACCACGCCCGGTGCCATGGCCCGGCAGCGTGTC
GGCACGGCGTTCATGACCGGCGTCAAGGTCATCGACATCTTCACGCCGCTGTGCCTAGGCCAGCGCCTCGGCGTCTTTGC
CGGCTCCGGCGTCGGCAAGTCGACGCTGCTTGCCATGCTCGCCGGTGCCGACGCTTTCGACACTGTCGTCGTGGCGCTGA
TCGGCGAACGCGGCCGCGAGGTCCGCGAATTCCTCGAGGATACGATCGGCGACAGCATGGCCAAGACCGTGGCCGTTGTC
GCCACCAGCGATGAGAGCGCCATGATGCGCCGGCGCGCACCCGACACCGCCATGCGGGTCGCGGAGCATTTTCGCGACCA
GGGCCACCGCGTGCTCCTGGTGCTGGATTCGATCACCCGCTTCGCCCATGCGTTGCGCGAAGTGGCGACGGGAACCGGCG
AGCCGCCGGTCGCCCGCGGATACCCTGCCTCGGTTTTCACAGAACTGCCGAAGCTGCTTGAGCGAGCCGGGCCAGGAGCT
GAGGGAAAAGGCTCGATTACCGCCATCATTTCCGTGCTGGTCGATGGCGACGATCACAACGATCCGGTCGCCGATTCCGT
GCGCGGCATCCTCGACGGCCATGTCGTGCTCGACCGCGCGATCGCCGAACAGGGCCGCTATCCGCCGGTCAATCCGCTGT
CGTCCATATCGCGTCTGGCTGGCAAGGCGTGGAGCCTCGAGCAGCGCGCCCTGGTGACCCGGCTGAAGTCGATGATCTCG
CGCTTCGAGGACACACGCGACATTCGCCTGCTCGGCGCCTATCAGGGTGGCGTCGATGCCGAGCTCGACATTGCCGTGCG
CCAGGTGCCGCTGATCTACGAGGCGCTGACGCAGTCGCCCAGGGACCGTCCTTCGACCGATCCGTTCTCCGACCTTGCCC
GTCATCTCAAGGGAAAGCAGAATGCCGAACCAGGAGAGTGA

Protein sequence :
MSLQQPSIRAPERQPQPAPEDRLAALERVWRRFSGADALVKRGGLVTEVTPTHYKVRGLSDFARLGDIVEQRGLAGARRG
EIVKISRDEVVVAPFERSADAGIGDAVFRRGPLAVAPHGSWRGRTIDALTRAIDGGPPLVRGDDMAASATTPGAMARQRV
GTAFMTGVKVIDIFTPLCLGQRLGVFAGSGVGKSTLLAMLAGADAFDTVVVALIGERGREVREFLEDTIGDSMAKTVAVV
ATSDESAMMRRRAPDTAMRVAEHFRDQGHRVLLVLDSITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPGA
EGKGSITAIISVLVDGDDHNDPVADSVRGILDGHVVLDRAIAEQGRYPPVNPLSSISRLAGKAWSLEQRALVTRLKSMIS
RFEDTRDIRLLGAYQGGVDAELDIAVRQVPLIYEALTQSPRDRPSTDPFSDLARHLKGKQNAEPGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-62 44
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-62 43
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-62 43
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-62 42
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-62 42
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-62 42
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-62 42
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-62 42
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-62 42
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-62 42
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-55 42
escN AAC38383.1 EscN Virulence LEE Protein 7e-58 41
escN AAC31513.1 L0034 Virulence LEE Protein 6e-58 41
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 6e-58 41
escN NP_290268.1 hypothetical protein Virulence LEE Protein 9e-58 41
ECs4568 NP_312595.1 EscN Virulence LEE Protein 9e-58 41
escN YP_003236088.1 translocator EscN Virulence LEE Protein 8e-58 41
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-56 41
escN YP_003223475.1 translocator EscN Virulence LEE Protein 3e-55 41
escN AAK26715.1 EscN Virulence LEE Protein 9e-55 41
escN AAL57542.1 EscN Virulence LEE Protein 9e-55 41
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-55 41
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_2015 YP_004610589.1 FliI/YscN family ATPase VFG0192 Protein 2e-58 44
Mesop_2015 YP_004610589.1 FliI/YscN family ATPase VFG0048 Protein 1e-62 43
Mesop_2015 YP_004610589.1 FliI/YscN family ATPase VFG2331 Protein 7e-60 43
Mesop_2015 YP_004610589.1 FliI/YscN family ATPase VFG2144 Protein 2e-61 41
Mesop_2015 YP_004610589.1 FliI/YscN family ATPase VFG0812 Protein 4e-58 41
Mesop_2015 YP_004610589.1 FliI/YscN family ATPase VFG0730 Protein 4e-58 41