Gene Information

Name : Mesop_2004 (Mesop_2004)
Accession : YP_004610578.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2087873 - 2088604 bp
Length : 732 bp
Strand : -
Note : COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005838:IPR005837; KEGG: mlo:mlr2924 flagellar biosynthesis protein FliP; PFAM: type III secretion system inner membrane P protein; SPTR: Flagellar biosynthetic protein FliP; TIGRFAM:

DNA sequence :
ATGAGAAAGTTCCTTCTCGCCGCGGCGCTGATCGGCGCCACCACATCGATTGCCGCGGCCCAGCAATTGGACCTTGGCGG
CATCGGCAAGGCCGACGGCACCACCGTCGGCTACATCATCCAGATGTTCGGCCTGCTGACCGTGCTGTCGGTGGCGCCGG
GCCTGCTGATCATGGTGACCAGCTTCACCCGTTTCGTCATCGCCTTCTCGATCCTGCGCGCCGGCATCGGCCTGCAATCG
ACACCCGCAAACCTTATCCTAATCTCGTTATCGCTGTTCATGACCTTCTACGTCATGGCGCCGACCTTCGACCAGGCCTG
GAACACCGGCGTCAAGCCGCTGATGGACAACCAGATCAGCCAGACCGAGGCCTTCGACAAGATCTCGGATCCGTTCCGCA
CCTTCATGCTGCACAATGTGCGCGATAAGGATTTCGACCTTTTCGCCGACCTCGCCCGCGAGCGTGGGCAGACCGTTTCG
CGCGACACCGTCGACCTGCGCATCCTGGTGCCTGCCTTCATGATTTCCGAGATCCGGCGCGGCTTCGAGATCGGCTTCCT
GATCGTGCTGCCGTTCCTGGTCATCGACCTGATCGTCGCCACCATCACCATGGCGATGGGCATGATGATGCTGCCGCCCA
CCGTGGTGTCTCTGCCATTCAAGATCCTGTTCTTCGTGCTGATCGACGGCTGGAACCTGCTCGTCGGCAGCCTGGTGCGC
TCGTTCAACTGA

Protein sequence :
MRKFLLAAALIGATTSIAAAQQLDLGGIGKADGTTVGYIIQMFGLLTVLSVAPGLLIMVTSFTRFVIAFSILRAGIGLQS
TPANLILISLSLFMTFYVMAPTFDQAWNTGVKPLMDNQISQTEAFDKISDPFRTFMLHNVRDKDFDLFADLARERGQTVS
RDTVDLRILVPAFMISEIRRGFEIGFLIVLPFLVIDLIVATITMAMGMMMLPPTVVSLPFKILFFVLIDGWNLLVGSLVR
SFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 6e-27 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 6e-27 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 6e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_2004 YP_004610578.1 flagellar biosynthetic protein FliP VFG1259 Protein 2e-50 49
Mesop_2004 YP_004610578.1 flagellar biosynthetic protein FliP VFG2338 Protein 7e-45 46
Mesop_2004 YP_004610578.1 flagellar biosynthetic protein FliP VFG2494 Protein 8e-49 46
Mesop_2004 YP_004610578.1 flagellar biosynthetic protein FliP VFG2016 Protein 4e-48 45
Mesop_2004 YP_004610578.1 flagellar biosynthetic protein FliP VFG0394 Protein 6e-34 42