Gene Information

Name : Mesop_1664 (Mesop_1664)
Accession : YP_004610240.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1718294 - 1720900 bp
Length : 2607 bp
Strand : +
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR018368:IPR001270:IPR003593:IPR017730:IPR 004176:IPR003959:IPR013093:IPR019489; KEGG: mlo:mll3429 endopeptidase Clp ATP-binding chain B, ClpB; PFAM: ATPase AAA-2 domain protein; C

DNA sequence :
ATGAACCTTGAGAAATATTCCGAGCGCGTGCGCGGCTTCATCCAGTCCGCGCAGACCATGGCGCTCTCACGCAATCACCA
GCAATTCACCCCCGAACATATCCTGAAAGTCCTCGTCGACGACGACGAAGGCCTGGCCGCGTCGCTGATCGAGCGCGCCG
GCGGCAATGTCCGCGACGTCAAGCTCGGCGTCGAGACGGCGCTCGAGGCGATGCCCAAGGTGGAAGGCGGCAACGGCCAG
CTCTATCTGGCGCAGCCTCTGGCCAAGGTGTTCTCGACCGCCGAGGAACTGGCCAAGAAGGCCGGTGACAGCTTCGTCAC
CGTCGAGCGGCTGCTGCAGGCGCTCACCATGGAGAAATCGGCCAAGACCGCCGACATCCTGGCCAAGGCCGGCGTCACCG
CGCAGGCGCTGAACCAGGTCATCAACGATGTCCGCAAGGGCCGCACCGCCGATTCGGCGAGTGCCGAACAGGGCTATGAC
GCGCTGAAGAAATACGCGCGCGACCTGACGGCGGATGCCCGCGCCGGCAAGCTGGACCCCGTGATTGGTCGTGACGACGA
GATCCGCCGCACCATCCAGGTGCTGTCGCGCCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCGGGCGTCGGCAAGA
CCGCGATCGCCGAAGGCCTGGCGCTGCGCATCGTCAATGGCGACGTGCCGGAATCGCTGAAGGACAAGCAGCTGATGGCG
CTCGACATGGGCGCGCTGATTGCCGGCGCCAAGTATCGCGGCGAGTTCGAGGAGCGGCTGAAGGCCGTGCTTTCAGAAGT
CACCTCGGCCAACGGCAGCATCATCCTGTTCATCGACGAGATGCACACGCTGGTCGGCGCCGGCAAGGCGGACGGCGCCA
TGGATGCGTCGAACCTTCTGAAGCCGGCGCTGGCGCGCGGCGAACTGCACTGCGTCGGCGCGACCACGCTCGATGAATAC
CGCAAGCATGTCGAGAAGGATCCGGCCCTTGCCCGCCGCTTCCAGCCGGTCTTCGTCGACGAGCCGACGGTGGAGGACAC
CGTCTCGATCCTGCGCGGCCTGAAGGAGAAGTACGAGCAGCACCACAAGGTGCGCATCTCGGACTCGGCGCTGGTGGCGG
CGGCGACGCTGTCCAACCGCTATATCGCCGACCGTTTCCTGCCCGACAAGGCGATCGACCTTGTCGATGAAGCCGCGTCG
CGGCTCAGGATGCAGGTCGATTCGAAGCCCGAGGCGCTGGACGAAATCGATCGCCGCATCATGCAGCTCAAGATCGAGCG
CGAGGCACTGAAGGTCGAGACGGACGATGCCTCGAAAGACCGGCTCGCCCGCCTGGAAAAGGAGCTGGTCGGCCTCGAGG
AGGAATCGACCGAGATCACCGCCAAGTGGCAGGCCGAGAAGCAGAAGCTTGGCCTCGCCGCCGACCTGAAGAAGCAGCTC
GACGAGGCGCGCAACGATCTGGCCATTGCCCAGCGCAAGGGTGAATTCCAGCGCGCCGGCGAGCTTGCCTATGGCAAGAT
CCCGGAGCTGGAAAAGAAGCTGAAGGAGGCCGAAGCCCAGGACGGCAAGGCGGGGATGGTCGAAGAGGTGGTCAACCCCG
ATCACGTTGCTCACATCGTCTCGCGCTGGACCGGCATTCCGGTCGACAAGATGCTGCAGGGCGAGCGCGACAAGCTGTTG
CGCATGGAAGACGAGATCGGCAAGCGTGTTGTCGGCCAGGGCGAGGCGGTGCAGGCTGTTTCGAAAGCCGTGCGTCGGGC
CCGTGCCGGCCTGCAGGATCCGAACCGGCCGATCGGCTCATTCATCTTCCTCGGGCCGACGGGTGTCGGCAAGACCGAAC
TGACCAAGGCGCTCGCCAGCTTCCTGTTCGACGACGACAGCGCCATGGTGCGCATCGACATGTCGGAGTTCATGGAAAAG
CACTCGGTCGCCCGGCTGATCGGCGCGCCTCCCGGCTATGTCGGCTATGAGGAGGGCGGTGCGCTGACCGAAGCCGTGCG
GCGCCGGCCCTATCAGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCATCCGGATGTCTTCAACGTCTTGCTGCAGGTTC
TCGATGACGGCCGCCTGACCGATGGCCAGGGTCGTACCGTCGATTTCCGCAACACGCTGATCATCATGACGTCGAACCTC
GGCGCCGAATATCTCGTCAATCTCGGCGAGGACCAGGATGTCGACGCGGTACGCGACGAGGTGATGGGCGTCGTCAGGGC
ATCGTTCCGGCCGGAGTTCCTCAATCGCGTCGACGAGGTGATCCTGTTCCACCGGTTGCGCCGCAAAGACATGGATCGCA
TCGTCGAAATCCAGCTCAAGCGGCTGGAGAGCCTGCTTGTCGATCGCAAGATCACGCTGGCGCTGGATCACGAGGCAATC
GAATGGCTGGCGGCCAAGGGTTACGATCCGGCCTATGGTGCGCGGCCGTTGAAGCGGGTGATGCAGAAGGACCTGCAGGA
TCCGTTGGCGGAGAAGATCCTGCTCGGCGAGATTCTCGACGGTTCGACCGTCAAGGTGACGGCGGGATCCGACCGGTTGA
ATTTCCGCTCGAAACCGACGATTGTCGCGGCCGAGGCGGCGGCCTGA

Protein sequence :
MNLEKYSERVRGFIQSAQTMALSRNHQQFTPEHILKVLVDDDEGLAASLIERAGGNVRDVKLGVETALEAMPKVEGGNGQ
LYLAQPLAKVFSTAEELAKKAGDSFVTVERLLQALTMEKSAKTADILAKAGVTAQALNQVINDVRKGRTADSASAEQGYD
ALKKYARDLTADARAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKQLMA
LDMGALIAGAKYRGEFEERLKAVLSEVTSANGSIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY
RKHVEKDPALARRFQPVFVDEPTVEDTVSILRGLKEKYEQHHKVRISDSALVAAATLSNRYIADRFLPDKAIDLVDEAAS
RLRMQVDSKPEALDEIDRRIMQLKIEREALKVETDDASKDRLARLEKELVGLEEESTEITAKWQAEKQKLGLAADLKKQL
DEARNDLAIAQRKGEFQRAGELAYGKIPELEKKLKEAEAQDGKAGMVEEVVNPDHVAHIVSRWTGIPVDKMLQGERDKLL
RMEDEIGKRVVGQGEAVQAVSKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFDDDSAMVRIDMSEFMEK
HSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNL
GAEYLVNLGEDQDVDAVRDEVMGVVRASFRPEFLNRVDEVILFHRLRRKDMDRIVEIQLKRLESLLVDRKITLALDHEAI
EWLAAKGYDPAYGARPLKRVMQKDLQDPLAEKILLGEILDGSTVKVTAGSDRLNFRSKPTIVAAEAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-109 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 6e-110 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-110 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_1664 YP_004610240.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-123 41