Gene Information

Name : Mesop_1553 (Mesop_1553)
Accession : YP_004610129.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1605450 - 1606367 bp
Length : 918 bp
Strand : -
Note : COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011932:IPR004107:IPR002104; KEGG: mlo:mlr3575 site-specific tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Tyrosine recombinase XerD;

DNA sequence : 
ATGAACAGCGCCGCCCGCATCGAGGCCTTCCTGGAAATGATGAGCGCCGAGCGTGGTGCTGCCGAGAACACGCTTTCCTC
CTATCGCCGCGATCTCGAAGACGCTTCGAACGAGATCGATGGCGGGCTTGCCGGTGCGGCGGCCGCCGACATCCGCGCCT
ATCTCGACGACATCGCCGCCCGCGGCTTCGCGCCGACGTCACAGGCGCGCAAATTGTCGGCGATCCGCCAGTTCTTCAAG
TTTCTCTACGCCGAGGGCCTGCGCGGCGACGACCCGACCGGCACGCTGGACAGCCCGAAAAAGGGACGGCCGCTGCCCAA
GACGATGTCCGAGGCCGACACCGGCAGGCTGATCGACCGCGCCGCCACCGAAGCCGGCGACGCAGGGCTCGGCCATGCCG
ACAGGCTGGCGGCCCTGCGCCTGCATGCGCTGGTCGAGGTGCTCTACGCCACGGGCCTGCGCGTTTCCGAACTGGTCGGC
CTGCCGGTGACGGTGGCGCAGCGCGACGACCGCTTCTTCATGGTGCGCGGCAAGGGCGACAAGGAACGCATGGTGCCGCT
GTCGGCCAAGGCGCGCGCGGCGATGCGAACCTGGCTTGCCGCCCGGGCCGGAGTGCCCGCCTTCGCAGAAAGCCCGTTCC
TGTTTCCGGCCGCCTCCGACAGCGGCTATCTTTCCCGCCAAGTCTTTGCCCGCGATCTGAAAGGGCTGGCGGCGCGGGCC
GGCATCGCCTCGGCCAAGGTTTCACCACACGTGCTGCGCCATGCCTTTGCCAGCCATCTCCTGCAGAACGGCGCCGATCT
CAGGGCCGTGCAGCAGTTGCTTGGCCATGCCGACATATCGACGACACAGATTTACACCCATGTGCTGGAGGAGCGGCTGG
TGCGGCTGGTCAACGATCATCATCCGCTTGCCGACTAG

Protein sequence : 
MNSAARIEAFLEMMSAERGAAENTLSSYRRDLEDASNEIDGGLAGAAAADIRAYLDDIAARGFAPTSQARKLSAIRQFFK
FLYAEGLRGDDPTGTLDSPKKGRPLPKTMSEADTGRLIDRAATEAGDAGLGHADRLAALRLHALVEVLYATGLRVSELVG
LPVTVAQRDDRFFMVRGKGDKERMVPLSAKARAAMRTWLAARAGVPAFAESPFLFPAASDSGYLSRQVFARDLKGLAARA
GIASAKVSPHVLRHAFASHLLQNGADLRAVQQLLGHADISTTQIYTHVLEERLVRLVNDHHPLAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-37 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-37 45