Gene Information

Name : Mesop_1442 (Mesop_1442)
Accession : YP_004610018.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator PhoB, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1487540 - 1488229 bp
Length : 690 bp
Strand : +
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011879:IPR001867; KEGG: mlo:mll3716 phosphate regulatory protein, PhoB; PFAM: response regulator receiver; transcripti

DNA sequence : 
ATGATCGCGCCACGCATCATGGTGGTGGAGGATGAGGAGCCGTTAGGGGTGCTGCTCCGCTACAATCTGGAATCGGAAGG
TTACCAGGTCGAGGTGGTGACGCGCGGCGACGAGGCGGAGATCCGCCTGCAGGAGAACGTGCCCGACCTTCTGGTGCTCG
ACTGGATGGTGCCGGCGGTGTCCGGCATCGAACTCTGCCGGCGCCTGCGAATGCGGCCCGAGACCGAGCGGCTGCCGATC
ATCATGCTGACCGCGCGGGGCGAAGAAAGCGACCGTGTACGTGGACTCTCCACAGGCGCCGACGACTATCTGGTCAAGCC
GTTCTCGACGCCGGAGTTCATGGCCCGCGTCAAGGCGTTGCTGCGCCGCGCCAAACCGGAAGTGCTGTCCAGCGTGCTCA
AGGTCGGCGACATCGTGCTCGACCGCGAATCGCACCGCGTCTACCGCAAGAAGAGCGAGATCCGGCTCGGGCCGACCGAG
TTCCGCCTGCTCGAATTCATGATGCGCCATCCCGGCCGGGTGTTCTCGCGCAGCCAGCTGCTCGACAATGTCTGGGGCGA
GACGATCTACATCGACGAGCGCACGGTCGACGTGCATGTCGGGCGGCTGCGCAAGGCGGTCAACAATGGCCGCATGCCCG
ATGTCATTAGAACCATTCGTGGGGCGGGCTACGCGATCCGGGAAGATTAG

Protein sequence : 
MIAPRIMVVEDEEPLGVLLRYNLESEGYQVEVVTRGDEAEIRLQENVPDLLVLDWMVPAVSGIELCRRLRMRPETERLPI
IMLTARGEESDRVRGLSTGADDYLVKPFSTPEFMARVKALLRRAKPEVLSSVLKVGDIVLDRESHRVYRKKSEIRLGPTE
FRLLEFMMRHPGRVFSRSQLLDNVWGETIYIDERTVDVHVGRLRKAVNNGRMPDVIRTIRGAGYAIRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-34 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_1442 YP_004610018.1 two component transcriptional regulator PhoB, winged helix family HE999704.1.gene2815. Protein 3e-39 44
Mesop_1442 YP_004610018.1 two component transcriptional regulator PhoB, winged helix family AE000516.2.gene3505. Protein 2e-34 43
Mesop_1442 YP_004610018.1 two component transcriptional regulator PhoB, winged helix family NC_011595.7057856.p0 Protein 3e-36 41
Mesop_1442 YP_004610018.1 two component transcriptional regulator PhoB, winged helix family NC_010410.6002989.p0 Protein 3e-36 41
Mesop_1442 YP_004610018.1 two component transcriptional regulator PhoB, winged helix family NC_010400.5986590.p0 Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesop_1442 YP_004610018.1 two component transcriptional regulator PhoB, winged helix family VFG1390 Protein 7e-38 43
Mesop_1442 YP_004610018.1 two component transcriptional regulator PhoB, winged helix family VFG1563 Protein 3e-34 43
Mesop_1442 YP_004610018.1 two component transcriptional regulator PhoB, winged helix family VFG1702 Protein 3e-34 43