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Name : Mesop_1216 (Mesop_1216) Accession : YP_004609795.1 Strain : Mesorhizobium opportunistum WSM2075 Genome accession: NC_015675 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1265978 - 1267258 bp Length : 1281 bp Strand : + Note : COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: rsh:Rsph17029_2136 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SP DNA sequence : ATGGCCCTGACGGTCCTGTTCGGCACCTTCGTCTTCCTGCTCGTCATCGGCACGCCGATCGCGTTCTGCCTCGGTGTCGC CAGCTTCGCCACCGTGCTGGTGCTGGGCCTGCCGCCGCTGGTGGTGTTCCAGCGCCTCAACTCCGGTGTCAGCGTGTTTT CGCTGATGGCGATCCCGTTCTTCATCTTCGCCGGCGACCTGATGGTGCGTGGCGGCATCGCCGCCAGGCTCGTGGCGCTG GCCGGTTCGCTGGTCGGTCATTTGCGCGGCGGCCTGGGCCAGGTCAACATCGCGGCGTCGACCATGTTCGGCGGCATTTC CGGCTCGGCGGTGGCCGATGCATCGGCGGTCGGCGGGCTGATGATCCCGCAGATGAAGGCGCGCGGCTACGGCATCGACT ATGCCGTCAACATCACCTCGGTCGGCGCCATCATCGCGCTGCTGATTCCGCCCTCGCACAACATGATCATCTATTCGATT TCGGCCGGGGGCCGGATCTCGATCGCCGACCTGTTCACGGCAGGCGTCATACCTGGCCTGCTGCTGGCATTGTCGCTGAT GGTCACCGCCTATTGGGTCGCGAGCCGCCGCGGCTACCCGACCGAGCCGTTCGCCGGCTTCGGCCGAGCCCTGCAGTTGC TCGTGACCGCCATCCCCGGCCTCGTCCTGATCGGCATCATCTTCGGCGGCGTGCGCTCCGGCATCTTCACCGCCACGGAA AGTTCCTGCATCGCCATCGTCTACGCCTTCCTGGTGACGCTGATCATCTACCGTTCGATGAGCTGGAACGACTTCGTCGC CGCCACCAGCGCCGCGGTGCGCACCACGGCGATGGTGCTGATGATCATAGGCTGCGCCGCGGCCTTCGGCTGGCTGCTCG CCTATCTCAGGGTGCCGGCGGCGCTGGTCGCCTTCCTCCAGTCGGTGTCCGACAACAAGCTGGTCATCCTGCTGCTGATC AATGTGGTGCTGCTCATCCTCGGCACGTTCATGGACATGTCGCCGCTGATCATCATCACGACGCCGATCTTCCTGCCGGT GGTCATGGCCTATGGCGTCGACCCCGTGCATTTCGGCGTCATCCTGATCCTCAATCTCGGCATTGGCCTGTGCACGCCAC CGGTCGGCGCGGTGCTGTTCGTCAGTTGCGCCATCGGGCGTATCCCGATCTGGACGGCGATGCGCTCGATCTGGCCCTTC TACGGGGCAGCCTTCGCCGTGTTGATGCTGGTCACCTACATTCCGGAAATCTCATTGTGGCTGCCCAGCCTTTTCCACTA G Protein sequence : MALTVLFGTFVFLLVIGTPIAFCLGVASFATVLVLGLPPLVVFQRLNSGVSVFSLMAIPFFIFAGDLMVRGGIAARLVAL AGSLVGHLRGGLGQVNIAASTMFGGISGSAVADASAVGGLMIPQMKARGYGIDYAVNITSVGAIIALLIPPSHNMIIYSI SAGGRISIADLFTAGVIPGLLLALSLMVTAYWVASRRGYPTEPFAGFGRALQLLVTAIPGLVLIGIIFGGVRSGIFTATE SSCIAIVYAFLVTLIIYRSMSWNDFVAATSAAVRTTAMVLMIIGCAAAFGWLLAYLRVPAALVAFLQSVSDNKLVILLLI NVVLLILGTFMDMSPLIIITTPIFLPVVMAYGVDPVHFGVILILNLGIGLCTPPVGAVLFVSCAIGRIPIWTAMRSIWPF YGAAFAVLMLVTYIPEISLWLPSLFH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 6e-40 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 6e-40 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 5e-40 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mesop_1216 | YP_004609795.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 3e-40 | 42 |
