Gene Information

Name : Mesop_1034 (Mesop_1034)
Accession : YP_004609614.1
Strain : Mesorhizobium opportunistum WSM2075
Genome accession: NC_015675
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1081960 - 1082715 bp
Length : 756 bp
Strand : +
Note : COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347:IPR002198; KEGG: mlo:mll4297 oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reducta

DNA sequence :
ATGAGTGAGGCGCAAAAGGTGCTGCTGGTTACCGGCGGCAGCCGTGGCATCGGCGCCGCGATCTGCCGGCTCGGGTCCAA
GGCCGGTTACCGCGTCGCGGTCAATTACGCCACGAACCGGAATGCCGCCGACGCGCTCGTTGCCCAGATCAGGGCCGCCG
GCGGAGAAGCGTTTCCGGTCAAGGGCAATGTCGGCGTGGAGTCCGATGTCGTGGCCATGTTCGGTGCCGTCGACCGCGCC
TATGGCCGGCTCGATGCCTTCGTCAACAATGCCGGCATCGTCGATCTCAAGGCGCGGGTCGACGAGATGTATGTCGCGCG
GCTGGAACGCATGATGCGCGTCAATGTCGTCGGTGCGTTCCTGTGCGCCCGCGAGGCGGTGAAGCGCATGTCGACCCGCT
ATGGCGGTTCGGGTGGCGCCATCGTCAACATCTCGTCGGCGGCCGCGACTTTGGGCTCGCCCGGCGAATATGTCGACTAT
GCCGCCTCCAAGGGTGCCGTCGACACGCTCACCATCGGGCTCGCCCGCGAGGTGGCGCTGGAAGGCATTCGTGTTAACGC
GGTGCGGCCCGGTATTATCGACACCGAAATCCACGCCTCCGGCGGGCAGCCGGACCGGGTGGAACGGTTCCGCGACATGC
TGCCGATGAAAAGAGCCGGCACGGCGGATGAAGTCGCGGGCGCGGTCCTCTATCTCTTGTCCGACGCCGCGTCCTATACG
ACGGGCGCGATCCTGAATGTCAGCGGCGGCCGTTGA

Protein sequence :
MSEAQKVLLVTGGSRGIGAAICRLGSKAGYRVAVNYATNRNAADALVAQIRAAGGEAFPVKGNVGVESDVVAMFGAVDRA
YGRLDAFVNNAGIVDLKARVDEMYVARLERMMRVNVVGAFLCAREAVKRMSTRYGGSGGAIVNISSAAATLGSPGEYVDY
AASKGAVDTLTIGLAREVALEGIRVNAVRPGIIDTEIHASGGQPDRVERFRDMLPMKRAGTADEVAGAVLYLLSDAASYT
TGAILNVSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 1e-55 52
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 4e-56 52