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Name : HBZC1_03190 (HBZC1_03190) Accession : YP_004607017.1 Strain : Helicobacter bizzozeronii CIII-1 Genome accession: NC_015674 Putative virulence/resistance : Virulence Product : ClpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 296376 - 298988 bp Length : 2613 bp Strand : + Note : - DNA sequence : ATGCCTCACACCAATATCTTTGAAAAACTCACCCACCAGCTTAAGGAAAGCCTCGATCAGGCCTTGAGTTTAGCCCTGCA CGCCAAAAACCAAGAGATCGAACCCATCCACCTTTTTTGGGCACTCTTAAGCAATAGCCAGTCTTTACTCAGCCATGCCT TGATTAAAATGGGCGTAGAGAAAACCCCCCTAGAGCTAGAGGCTAGAAGTATCGTAGATAGCCTGCCTAAGAGCTCGAGC GTGAGCGCGCAGGGGATTAGCCTGAGTAAAAACCTCTTAGATGCCCTGCATAGTGCTTTGGGCTGGAGTGTGAAAAATGG GGATCAATTCGTGGCAGTGGATAGTTTTATCATTGCCAATGCCGCGCTTTTTAGCCAGTATTTTAAACAATTCTTAGATA CCCCAGAGCTTGTCAAGACCCTAGAGAGTATGCGTAAAGGGGTGAAAATCAACCAGCCTAGCGATGATGCTACTTTAGAA GCCTTAGAAAAATACGGGATTAATCTGACCACTAAAGCCCTAGAAAACACCCTAGACCCGGTCATCGGGCGCGATGAAGA GATTTTGCGCATGATGCAGATTTTGATTCGTAAGACTAAAAATAACCCCATTTTGCTAGGCGAACCCGGGGTAGGCAAAA CCGCTATTGTGGAAGGACTAGCCCAGCGCATCGCCAAAAAAGAAGTGCCCCTATCTTTGCAACACAAGCAAGTTGTCATG CTGGATTTGAGCATGCTCATTGCCGGGGCGAAGTATCGGGGAGAATTTGAGGAACGCCTAACTAAGGTGGTAGAGGAGGT CAAAAAAGCGGGCAATGTGATTTTATTCATCGATGAAATCCATACCATCGTGGGCGCGGGGGCGAGCGAGGGGAGCATGG ACGCGGCTAATATTTTAAAGCCTGCCTTAGCGCGCGGGGAGTTGCACACCATCGGGGCGACCACGCTTAAGGAGTACCGC AAATACTTTGAAAAAGATAGCGCGCTCACGCGCCGCTTCCAGCCTATCGCCTTGGATGAGCCTAGCGTGAATGAAACCTT GCAAATTCTAAGAGGACTCAAAGAGAATTTAGAGGCACACCACAATGTGAGTATCACCGATAGCGCGTTAGTCGCCAGTG CCAAGCTCTCGCACCGCTACATCACTAACCGCTTTTTACCTGATAAAGCCATTGATTTAATTGATGAGGCGGCTGCCGAA TTGAAAATGCAAATCGAATCCGAACCCTATGCCCTCTCCCACACCAAAAGATTAGTGCAACAACTAGAGGTAGAAAAACA AGCCCTGCTGATGGAGGAAAACCCTAGCAACAAGCAACGCCTAGAGGAAGTGCAAAAGGAACTCAGCGATGCCCTAGAGG AAAAACAACGCTTAGAGGCGCAGTTTGAAAATGAAAGACGGGTGTTTAAGGACATCGCGCAGGCTAAGAACAATATTGAG GGCTTGAGGCGCGAATCTGAGCTGGCAAAACGCCAATCGGAGTTTGAAAAGGCGGCTAAAATTGATCATGGCGAGATTCC TAAGTTAGAACAGGCAGTGCGTGATTTAGAGGCACAATGGGCGCGCATGCAAGAGCATGGGAGTTTGCTCCAACACGCAG TTACTAAAGATAGTATCGCGCGCATTGTGAGCAAATGGACGCATATCCCGGTCCAAAAGATGTTGCAAGAGGAAAAGGAC AAGATTTTACACATCGAGCAAGAGCTCGCTAAGAGCGTGATCGGGCAATCCCAAGCCATTAGCGCGATTGCTAAAGCCAT CAAGCGCAATAAGGCAGGCTTGAGTGATCCCAATAAACCCATTGGAAGTTTTCTATTTTTAGGACCTACGGGTGTGGGTA AAACCCAAAGTGCCAAGACCTTAGCCCAATTTCTCTTTGATAGCCAAAAGAATTTGATCAGGCTAGACATGAGCGAATAC ATGGAAAAGCACGCGGTGAGTCGCTTGGTGGGCGCGCCCCCCGGGTATGTGGGCTATGAAGAAGGGGGGCAACTCACTGA GGCGGTTAGGCGTAGCCCTTATAGCGTGCTCCTCTTTGATGAGATCGAAAAGGCGCACCCGGAGGTGTTTAACATGCTCT TGCAGGTGCTCGATGAGGGACGGCTTACAGATAATAAGGGCGTTGTGGTGGATTTTAAAAACACCATTATTATTTTGACC AGCAATATTGCCAGTGATAAAATTTTAGAATTTGAAAACATCCATGCCAAGCACAAAGCCGAACAAGAGGTGTTGAAAGC CTATGACATTGAGAGCGATCAGATCATGGAGCTAAGTGAAGAGCACGATAAACAAGCTATGGTGCAAGAAGCCCTAAAAG CCTACTTCAAGCCCGAATTTTTAAACCGCTTGGATGAGATTGTGATCTTCAACCCTTTGCACTTGGAATCGATCATGCAG ATTGTGGATTTGATGTTTGCAGATATTCAAGAGAAACTCAGCGAGCGGGGGTTGCAAATAGAGTTGAGCCCGCAGGCTAA GGAATACATCGCCAAAAGTGGGTTTGATCCCATCTATGGCGCGCGCCCCCTCAAACGGGCTTTATATGATGAAGTGGAGG ATAGATTAGCTACGCTTCTTTTGGAAACAGATAGACGCACATTTGAGCGATAA Protein sequence : MPHTNIFEKLTHQLKESLDQALSLALHAKNQEIEPIHLFWALLSNSQSLLSHALIKMGVEKTPLELEARSIVDSLPKSSS VSAQGISLSKNLLDALHSALGWSVKNGDQFVAVDSFIIANAALFSQYFKQFLDTPELVKTLESMRKGVKINQPSDDATLE ALEKYGINLTTKALENTLDPVIGRDEEILRMMQILIRKTKNNPILLGEPGVGKTAIVEGLAQRIAKKEVPLSLQHKQVVM LDLSMLIAGAKYRGEFEERLTKVVEEVKKAGNVILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYR KYFEKDSALTRRFQPIALDEPSVNETLQILRGLKENLEAHHNVSITDSALVASAKLSHRYITNRFLPDKAIDLIDEAAAE LKMQIESEPYALSHTKRLVQQLEVEKQALLMEENPSNKQRLEEVQKELSDALEEKQRLEAQFENERRVFKDIAQAKNNIE GLRRESELAKRQSEFEKAAKIDHGEIPKLEQAVRDLEAQWARMQEHGSLLQHAVTKDSIARIVSKWTHIPVQKMLQEEKD KILHIEQELAKSVIGQSQAISAIAKAIKRNKAGLSDPNKPIGSFLFLGPTGVGKTQSAKTLAQFLFDSQKNLIRLDMSEY MEKHAVSRLVGAPPGYVGYEEGGQLTEAVRRSPYSVLLFDEIEKAHPEVFNMLLQVLDEGRLTDNKGVVVDFKNTIIILT SNIASDKILEFENIHAKHKAEQEVLKAYDIESDQIMELSEEHDKQAMVQEALKAYFKPEFLNRLDEIVIFNPLHLESIMQ IVDLMFADIQEKLSERGLQIELSPQAKEYIAKSGFDPIYGARPLKRALYDEVEDRLATLLLETDRRTFER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-93 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HBZC1_03190 | YP_004607017.1 | ClpB protein | VFG0079 | Protein | 2e-152 | 41 |
| HBZC1_03190 | YP_004607017.1 | ClpB protein | VFG2084 | Protein | 2e-100 | 41 |
