Gene Information

Name : HBZC1_02740 (HBZC1_02740)
Accession : YP_004606972.1
Strain : Helicobacter bizzozeronii CIII-1
Genome accession: NC_015674
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 256146 - 256412 bp
Length : 267 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGCCCAACTGATGAAACTTGCCATTGAAACCTATAAAATCACCTTGATGATCTCCTTGCCCGTGTTGTTGGTGGG
CTTGGTGGTCGGGCTCTTGGTGAGCATTTTCCAAGCCACCACGCAAATTAATGAGATGACCCTCTCTTTTGTGCCCAAAA
TCCTCGCCGTGATCGCCGTGATCATCTTAACCATGCCTTGGATGCTCAACATGCTTTTAGATTACACACGCATGCTTTTT
AAGTTGATTCCTAAAATTGTGTCTTAG

Protein sequence :
MEAQLMKLAIETYKITLMISLPVLLVGLVVGLLVSIFQATTQINEMTLSFVPKILAVIAVIILTMPWMLNMLLDYTRMLF
KLIPKIVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaS NP_456108.1 putative type III secretion protein Virulence SPI-2 Protein 4e-04 41
ssaS NP_805091.1 type III secretion protein Virulence SPI-2 Protein 4e-04 41
ssaS YP_216428.1 secretion system apparatus protein SsaS Virulence SPI-2 Protein 3e-04 41
ssaS NP_460385.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-04 41
ssaS CAA68200.1 secretion system apparatus, SsaS Virulence SPI-2 Protein 2e-04 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HBZC1_02740 YP_004606972.1 flagellar biosynthesis protein FliQ VFG2339 Protein 6e-12 53
HBZC1_02740 YP_004606972.1 flagellar biosynthesis protein FliQ VFG0520 Protein 8e-05 41