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Name : HBZC1_02060 (HBZC1_02060) Accession : YP_004606904.1 Strain : Helicobacter bizzozeronii CIII-1 Genome accession: NC_015674 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 190863 - 192365 bp Length : 1503 bp Strand : - Note : - DNA sequence : ATGTTTGATAACCCCTATATCCAGCAACGCATCCAAAAGGGCGAGCATTTGCGCCAAATGGCTTTAAACCCCTATGACAA CCAAGTTACACGCACCCTAGAAAATGCCGCCTTCCTAGAGCGTTTTAAAGACTTGCACACCCAAGAGGAGCCCAAAGACC CCACTAGCGTGCATGCCCTCGTGGGGCGGGTGCGTTTTATCCGCTTGATGGGCAAGGCGTGCTTTATGAAAATCGAGGAT CAAAGTGCCTTAGTGCAAGTCTATTTGTCCCAAAACGATTTGGGTCAAGAGGGCTTTGAAACCTTTAAAAAATGCGTGGA AGTGGGGGATATTCTCAATGTCGTGGGCTACCCCTTTGTTACCAAGACGGGCGAGTTGAGCCTGCATGCCAGCACTTATA AAATCCTCACCAAAGCCATTGTGCCCTTGCCCGAGAAGTTCCATGGCTTGAGCGATATAGAACTGCGTTACCGCCAACGC TATGTGGATTTGATCGCCAACCCGGAGGTCAAGGAGGTTTTTAAAACCCGTAGCCAAATTGTGGCTATGATTCGCTACTT TTTTGAACAAAAAGGCTTTTTGGAGGTGGAAACCCCCATGATGCACCCCATCGCTGGGGGGGCTAATGCACGCCCCTTTA TCACCTACCACAATGCCCTAGAAGTGGAACGCTACTTGCGTATCGCCCCGGAGCTGTATTTAAAACGCCTAGTGGTGGGC GGGTTTGAGGCGGTGTTTGAAATCAACCGCAATTTTAGAAATGAGGGCATGGATCACTCGCATAATCCCGAATTTACGAT GCTAGAATTTTACTGGGCGTATAAGACTTATGAGGATTTGATCGCGCTGACCCAAGAATTATTCCATGAACTCTTAAAAA CCCTCCAGCTACCCACCCAAATCCCCTACCAAGACTCAGTAATTGATTTTAACGCCTTTAGTGTGATGAGTTTCCGCCAA GCACTCTTAGAAATTGGGGGCGTGGCGTTGGGGGTTTTAGAAGACCCCAAACAATTAAGAGATTTTTTAACACAACAAGG CGTGGCTTTAGAGGTGTCTTTAAATTATGGGCAACTTTTAGCAGAGGCTTTTGATTTGCTTGTTGAGCCCAAACTCATTA ACCCGACCTTCATCACGCAATACCCCATAGAGATTAGCCCCCTAGCACGGCGTAACGATCGTGATCCCAGTATCGCCGAT CGCTTTGAGCTTTTCATTGCGGGCAAGGAGATTGCCAATGGCTTTAGCGAGCTTAACGACCCAATCGATCAGTATGGGCG TTTTGAGGAACAAGCCAGAGCCAAAGAGCAAGGCGATGAGGAGGCGCAATTTATGGATGAAGATTATGTTTGGGCTTTGG GTCTGGGCATGCCCCCCACAGCTGGGGAGGGGATTGGCATTGATCGGCTGGTGATGTTGCTCACCAATGCCAAGAGTATT AAAGATGTGATTTTATTCCCGGCAATGAAACCCCTACCCCCTAAAGAGAGAACCCATGAGTAA Protein sequence : MFDNPYIQQRIQKGEHLRQMALNPYDNQVTRTLENAAFLERFKDLHTQEEPKDPTSVHALVGRVRFIRLMGKACFMKIED QSALVQVYLSQNDLGQEGFETFKKCVEVGDILNVVGYPFVTKTGELSLHASTYKILTKAIVPLPEKFHGLSDIELRYRQR YVDLIANPEVKEVFKTRSQIVAMIRYFFEQKGFLEVETPMMHPIAGGANARPFITYHNALEVERYLRIAPELYLKRLVVG GFEAVFEINRNFRNEGMDHSHNPEFTMLEFYWAYKTYEDLIALTQELFHELLKTLQLPTQIPYQDSVIDFNAFSVMSFRQ ALLEIGGVALGVLEDPKQLRDFLTQQGVALEVSLNYGQLLAEAFDLLVEPKLINPTFITQYPIEISPLARRNDRDPSIAD RFELFIAGKEIANGFSELNDPIDQYGRFEEQARAKEQGDEEAQFMDEDYVWALGLGMPPTAGEGIGIDRLVMLLTNAKSI KDVILFPAMKPLPPKERTHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-107 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HBZC1_02060 | YP_004606904.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-108 | 50 |
