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Name : HBZC1_13700 (HBZC1_13700) Accession : YP_004608068.1 Strain : Helicobacter bizzozeronii CIII-1 Genome accession: NC_015674 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1273239 - 1274489 bp Length : 1251 bp Strand : + Note : - DNA sequence : ATGATTGATAAAAAATTATTATTGCAAGACTTTGAGGGTTTGTGCGCCAATTTAGCCAAACGCTTTTTAGACCCCCAAAT TTTAGAGGATTTAAAAACCCTCTTGTTAGAGTATAAAGCCCAAAAACTCGCCCTCGAACAAGCCCAAGAATTCCAAAACA AGACCTCTAAACTTTTTTTTAACCAACAAAAAGAAAATAGCCCCGATCTAGGCACGCTCAAAGCCTCCCTAGAGGACAAT AAAAACAAGATCAACACGCTTCAAGAACAAGTCAATGCCCTAGAGCAACAACTAGATACCCTCTTACACACCATCCCCAA TTTGTTAGATCCTATAACACCCTTTGGCAAAGATGAAAACGATAATGTGGAGATTGAGCGGATTTTAGAGCCTAAAACTT TTGATTTTGTGCCCAAAGAGCACCATGAGTTAGCCCAAAACAATGGCTGGATCGAGTTTGAGCGGGGCGTGAAATTGGCT AAAAGCCGTTTTAGTGTGTTGCGTCAAGAGGGCGCGCGCCTCAACCGGGCTTTAATTAATTTTATGCTCGATTACAACGC CGCCCAAGGTTTTGAGATTGTATCTGTGCCCGTTGTGGTGAATAACACCGCCCTTTTTGGCACGGGGCAACTCCCCAAAT TTAAAGAGGATTTGTTTAAAATCGAGGGCGAGGAGCTGTATTTGATCCCCACCTCTGAGGTGAGTTTGACTAATCTCTAC GCCGATGAGATTTTATTAGCTGAGGAATTGCCTATTTTAATGACCGCCTACACGCCTTGCTTTAGAAAAGAAGCCGGGAG TGCTTCCAAAGACACGCATGGGATCATCCGCCAACACCAATTTGATAAAGTCGAGCTAGTGGCACTCACCCACCCCAAAG AGAGCGAGAGCATGCAGGCTAAAATGGTGCAAACGGCAAGCGGGATTTTAAAAGCCCTAGAATTACCCCACCGCTTGGTG CAACTTTGTAGCGGGGACATTGGTTTTAGTGCCAGCAACACCATAGACATTGAAGTTTGGTTGCCCGGGCAAAATTGCTA CCGCGAGATCAGTTCTATTTCTAATACCCGGGATTTCCAAGCCCGCCGTGCCAAAATCCGCTACAAGGAGAACAAAAAAA ATGCCTTCGTGCATACCCTCAATGGATCGTCCTTAGCTGTGGGGCGCACTTTGGTGGCGATCATGGAAAATTACCAAGAC CAAGAGGGGCGTATTGTTATCCCCAAAGCCCTTAAACCTTACTTGCAATAA Protein sequence : MIDKKLLLQDFEGLCANLAKRFLDPQILEDLKTLLLEYKAQKLALEQAQEFQNKTSKLFFNQQKENSPDLGTLKASLEDN KNKINTLQEQVNALEQQLDTLLHTIPNLLDPITPFGKDENDNVEIERILEPKTFDFVPKEHHELAQNNGWIEFERGVKLA KSRFSVLRQEGARLNRALINFMLDYNAAQGFEIVSVPVVVNNTALFGTGQLPKFKEDLFKIEGEELYLIPTSEVSLTNLY ADEILLAEELPILMTAYTPCFRKEAGSASKDTHGIIRQHQFDKVELVALTHPKESESMQAKMVQTASGILKALELPHRLV QLCSGDIGFSASNTIDIEVWLPGQNCYREISSISNTRDFQARRAKIRYKENKKNAFVHTLNGSSLAVGRTLVAIMENYQD QEGRIVIPKALKPYLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-81 | 45 |
