Gene Information

Name : HBZC1_13320 (HBZC1_13320)
Accession : YP_004608030.1
Strain : Helicobacter bizzozeronii CIII-1
Genome accession: NC_015674
Putative virulence/resistance : Resistance
Product : acetate permease ActP
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 1236302 - 1237633 bp
Length : 1332 bp
Strand : -
Note : -

DNA sequence :
GTGGGCTTTTTGGTGGGCTGGCCTATCATCTTGTTTTTAATTGCCGAAAAGTTCCGCAATTTGGGCAAATTCACCTTTGC
AGACATCACGGCTTACCGCTTGGATGCCAAACCTATCCGTGTGATCTCAGCGATCTCGGCTCTGAGCGTGGTGGTCTTTT
ATTTGATCGCCCAAATGGTGGGTGCGGGGCAGTTGATCCAACTGCTCTTTGGTCTGCCCTACTGGCTGGCGGTGGTGCTG
GTGGGCGTGCTGATGATTTGTTATGTCGCCTTTGGGGGCATGCACGCCACAACATGGGTGCAAATCATCAAGGCGATTTT
GCTCTTATTGGGGGCTTCGTTCATGGCGGTGATGATCTTATACTTGACCAAATTTGACTTAAGCCACTATTTTGGGCAAG
CCATCAAACACCACCCTAAAGGGGAGGCGATCATGTCCCCGGGCACTTTTTTACCCAACCCCATCGCCGCCATCTCTCTA
GGTCTGGCCTTGATGTTTGGCACGGCAGGTTTGCCCCATATTCTTATGCGTTTTTTCACGGTCAAAGATGCTAAAGAGGC
GCGCAAATCGGTTTTTTATGCCACCGGTTTCATTGGGTATTTTTACATCCTCACCTTCATTATCGGGTTTGGGGCGATTG
CCTTGCTCTACGCCCAAAGCGAATTTGTCAATCCTGATGGCACTTACAATGGGCTTAAAAACATGGTGGCGATCAATTTA
GCCGGCGTGGTGGGGGGCGATGTTTTCTTGGGCTTCATCTCAGCGGTTGCCTTTGCCACTATTTTAGCGGTGGTCTCAGG
GCTAGCCATCTCAGGAGCGGGCGCAATTAGCCATGATCTCTTTGTCAATGTCTATAAAAATGGCTTATGCGATCCCAAAC
TAGAGATGAAGGTAACTAAAGGTGCGACTTTATTTTTAGGGTTGCTAGCCATTGTCTTGGGGTTGGTGTTTGAAAACCAA
AATGTCGCCTTCATGGTGGGGCTGGCCTTTGGGATTGCCGCTAGCGTGAATTTCCCCATCTTGCTTTTGAGCATTTATTG
GAAGGATCTCACAACTAGGGGCGCATTTTGGGGCGGGTTAATTGGCTGGCTAGTGGTGATCACGATGGTTTTACTCAGCC
CCAGCATTTGGGTGAAGAGTTTTGGGCATGCCCAAGCCATTTTCCCCTACGATCACCCCGCCCTTTTTTCCATGCCCTTA
ACCTTTATTCTCATCATTTTGATTTCTAAGATGGACAAGAGTCCCAGAGCCCAAGTCGATCGGGCAGGCTTTAAGGCACA
AGATTTCCGCGCCCAAAGTGGCGTGGGGAGCGCACAAGCCTTAGCACACTAG

Protein sequence :
MGFLVGWPIILFLIAEKFRNLGKFTFADITAYRLDAKPIRVISAISALSVVVFYLIAQMVGAGQLIQLLFGLPYWLAVVL
VGVLMICYVAFGGMHATTWVQIIKAILLLLGASFMAVMILYLTKFDLSHYFGQAIKHHPKGEAIMSPGTFLPNPIAAISL
GLALMFGTAGLPHILMRFFTVKDAKEARKSVFYATGFIGYFYILTFIIGFGAIALLYAQSEFVNPDGTYNGLKNMVAINL
AGVVGGDVFLGFISAVAFATILAVVSGLAISGAGAISHDLFVNVYKNGLCDPKLEMKVTKGATLFLGLLAIVLGLVFENQ
NVAFMVGLAFGIAASVNFPILLLSIYWKDLTTRGAFWGGLIGWLVVITMVLLSPSIWVKSFGHAQAIFPYDHPALFSMPL
TFILIILISKMDKSPRAQVDRAGFKAQDFRAQSGVGSAQALAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 2e-98 55
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 2e-59 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HBZC1_13320 YP_004608030.1 acetate permease ActP BAC0570 Protein 3e-110 63
HBZC1_13320 YP_004608030.1 acetate permease ActP BAC0564 Protein 2e-118 62