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Name : HBZC1_11790 (HBZC1_11790) Accession : YP_004607877.1 Strain : Helicobacter bizzozeronii CIII-1 Genome accession: NC_015674 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1083730 - 1085301 bp Length : 1572 bp Strand : + Note : - DNA sequence : ATGTTACAATGTGCCCAATCTATCAAAAGGTATTGCATGCAATCTTTAGCCTTAAGCCCCCAAGATTTGCCCACACTCCA AAACATGGCAACCACTTTGCGTTTTTTATGTGCCGATATGGTGCAACAAGCCAATAGTGGGCATCCGGGCGTGGCGATGG GGTTAGCCGATGTGGGGGTGGTGCTAGGTTTGCACCTAAAAATCAACCCTAAAAACCCGGCATGGCTTAATCGCGATCGC CTTGTCTTTAGTGGCGGGCATGCCAGTGCCCTAGCCTATGCGCTCTTGCATTTGTGGGGGTTTAATATCAGTTTGGAGGA TTTAAAAGCCTTTAGACAACTCAATTCCAAAACCCCCGGGCATTTAGAATACAAGCACACAGAGGGCATTGAGATCACCA CTGGACCTCTAGGACAGGGCTTTGCTAACGCTGTGGGTTTTAGCATGGCAAGCAAGTTAGCCCAAGAGATGCTGGGTGCA GAGATCATCAATCACAAGGTCTATTGTCTGTGTGGGGATGGGGATTTGCAAGAGGGCTTGAGCTATGAGAGCGCATCTTT AGCCGGGCATTTGGGGCTTAAAAATCTCATTGTGATCTATGATAGCAACGCCATCACCATTGAGGGGGATACCCATCTAG CCTTTAGCGAAGATGTGGGGTTGCGCTTTAAAGCACAGGGCTGGGAGGTGTTAAACTGTGATGGGCATGATTTTTTAGAC ATCGATCGGGCTTTAAGAGAGGCACAAGGGAGCACTAAACCCACGCTCATCATCGCTAAAACCACCATCGGCAAGGGGGC TTTGGGCTTGGAGGGGAGTTCTAAGGTGCATGGCGCGCCTTTGGGCTTGGAGGTGTTGGAGAACTCTAAGCGGGTTTTAA ACTGGGACCACCCCTCTTTTTATGTCCCTAAAAGTGTTGCGTTGCATTTCCACATGGAAAAAAACGAGGTGTGGGAGCGT TTGTGGGAGCAAAAGCTCACCCCAAGCATCCAAGAGCAGATCGCCCACTTGCAAGCCAAGGATTTTAGCCAAGTGGCTTA CCCCACTTTTGAGGTCGGGCAACAAATTGCCACGCGGGTGAGCAATGGCAAAATCTTAAATGCGATCAGTCAGGCTTACA AAGGCTTTTTAGGCGGGAGTGCGGATTTAGCCCCCTCTAACAACACCACCTTAAGCCACCAGCAGGACTTTTCACCCACC CACGCAGGGCGTAATCTGCATTTTGGGATCAGAGAGCATGCCATGGGGGCAATTTGCAATGGAATCGCTAATTATGGCTT GTTTGTGCCCTATTGTGCGACCTTTTTTGTCTTTAGCGATTATTTATGTGCCAGTTTGCGCTTAAGTGCCTTGATGGGCA ACCAAGTTTTTTATATTTTCACCCATGATAGTATCGGGGTGGGCGAGGATGGTCCGACTCATCAGCCCATCGAACAACTT AGCCACCTAAGAGCCTTGCCTAATTTCTATGTCTTTAGACCTATGGATGCCCATGAAAATGTCCTTTGTTGGCAGGTGGC TTTGAATCTTAAAAAGAGTTGTGCTTTTGTGTTGAGTCGACCAAAACCTTGA Protein sequence : MLQCAQSIKRYCMQSLALSPQDLPTLQNMATTLRFLCADMVQQANSGHPGVAMGLADVGVVLGLHLKINPKNPAWLNRDR LVFSGGHASALAYALLHLWGFNISLEDLKAFRQLNSKTPGHLEYKHTEGIEITTGPLGQGFANAVGFSMASKLAQEMLGA EIINHKVYCLCGDGDLQEGLSYESASLAGHLGLKNLIVIYDSNAITIEGDTHLAFSEDVGLRFKAQGWEVLNCDGHDFLD IDRALREAQGSTKPTLIIAKTTIGKGALGLEGSSKVHGAPLGLEVLENSKRVLNWDHPSFYVPKSVALHFHMEKNEVWER LWEQKLTPSIQEQIAHLQAKDFSQVAYPTFEVGQQIATRVSNGKILNAISQAYKGFLGGSADLAPSNNTTLSHQQDFSPT HAGRNLHFGIREHAMGAICNGIANYGLFVPYCATFFVFSDYLCASLRLSALMGNQVFYIFTHDSIGVGEDGPTHQPIEQL SHLRALPNFYVFRPMDAHENVLCWQVALNLKKSCAFVLSRPKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-79 | 43 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 9e-68 | 42 |
