Gene Information

Name : HBZC1_11790 (HBZC1_11790)
Accession : YP_004607877.1
Strain : Helicobacter bizzozeronii CIII-1
Genome accession: NC_015674
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 1083730 - 1085301 bp
Length : 1572 bp
Strand : +
Note : -

DNA sequence :
ATGTTACAATGTGCCCAATCTATCAAAAGGTATTGCATGCAATCTTTAGCCTTAAGCCCCCAAGATTTGCCCACACTCCA
AAACATGGCAACCACTTTGCGTTTTTTATGTGCCGATATGGTGCAACAAGCCAATAGTGGGCATCCGGGCGTGGCGATGG
GGTTAGCCGATGTGGGGGTGGTGCTAGGTTTGCACCTAAAAATCAACCCTAAAAACCCGGCATGGCTTAATCGCGATCGC
CTTGTCTTTAGTGGCGGGCATGCCAGTGCCCTAGCCTATGCGCTCTTGCATTTGTGGGGGTTTAATATCAGTTTGGAGGA
TTTAAAAGCCTTTAGACAACTCAATTCCAAAACCCCCGGGCATTTAGAATACAAGCACACAGAGGGCATTGAGATCACCA
CTGGACCTCTAGGACAGGGCTTTGCTAACGCTGTGGGTTTTAGCATGGCAAGCAAGTTAGCCCAAGAGATGCTGGGTGCA
GAGATCATCAATCACAAGGTCTATTGTCTGTGTGGGGATGGGGATTTGCAAGAGGGCTTGAGCTATGAGAGCGCATCTTT
AGCCGGGCATTTGGGGCTTAAAAATCTCATTGTGATCTATGATAGCAACGCCATCACCATTGAGGGGGATACCCATCTAG
CCTTTAGCGAAGATGTGGGGTTGCGCTTTAAAGCACAGGGCTGGGAGGTGTTAAACTGTGATGGGCATGATTTTTTAGAC
ATCGATCGGGCTTTAAGAGAGGCACAAGGGAGCACTAAACCCACGCTCATCATCGCTAAAACCACCATCGGCAAGGGGGC
TTTGGGCTTGGAGGGGAGTTCTAAGGTGCATGGCGCGCCTTTGGGCTTGGAGGTGTTGGAGAACTCTAAGCGGGTTTTAA
ACTGGGACCACCCCTCTTTTTATGTCCCTAAAAGTGTTGCGTTGCATTTCCACATGGAAAAAAACGAGGTGTGGGAGCGT
TTGTGGGAGCAAAAGCTCACCCCAAGCATCCAAGAGCAGATCGCCCACTTGCAAGCCAAGGATTTTAGCCAAGTGGCTTA
CCCCACTTTTGAGGTCGGGCAACAAATTGCCACGCGGGTGAGCAATGGCAAAATCTTAAATGCGATCAGTCAGGCTTACA
AAGGCTTTTTAGGCGGGAGTGCGGATTTAGCCCCCTCTAACAACACCACCTTAAGCCACCAGCAGGACTTTTCACCCACC
CACGCAGGGCGTAATCTGCATTTTGGGATCAGAGAGCATGCCATGGGGGCAATTTGCAATGGAATCGCTAATTATGGCTT
GTTTGTGCCCTATTGTGCGACCTTTTTTGTCTTTAGCGATTATTTATGTGCCAGTTTGCGCTTAAGTGCCTTGATGGGCA
ACCAAGTTTTTTATATTTTCACCCATGATAGTATCGGGGTGGGCGAGGATGGTCCGACTCATCAGCCCATCGAACAACTT
AGCCACCTAAGAGCCTTGCCTAATTTCTATGTCTTTAGACCTATGGATGCCCATGAAAATGTCCTTTGTTGGCAGGTGGC
TTTGAATCTTAAAAAGAGTTGTGCTTTTGTGTTGAGTCGACCAAAACCTTGA

Protein sequence :
MLQCAQSIKRYCMQSLALSPQDLPTLQNMATTLRFLCADMVQQANSGHPGVAMGLADVGVVLGLHLKINPKNPAWLNRDR
LVFSGGHASALAYALLHLWGFNISLEDLKAFRQLNSKTPGHLEYKHTEGIEITTGPLGQGFANAVGFSMASKLAQEMLGA
EIINHKVYCLCGDGDLQEGLSYESASLAGHLGLKNLIVIYDSNAITIEGDTHLAFSEDVGLRFKAQGWEVLNCDGHDFLD
IDRALREAQGSTKPTLIIAKTTIGKGALGLEGSSKVHGAPLGLEVLENSKRVLNWDHPSFYVPKSVALHFHMEKNEVWER
LWEQKLTPSIQEQIAHLQAKDFSQVAYPTFEVGQQIATRVSNGKILNAISQAYKGFLGGSADLAPSNNTTLSHQQDFSPT
HAGRNLHFGIREHAMGAICNGIANYGLFVPYCATFFVFSDYLCASLRLSALMGNQVFYIFTHDSIGVGEDGPTHQPIEQL
SHLRALPNFYVFRPMDAHENVLCWQVALNLKKSCAFVLSRPKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-79 43
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 9e-68 42