|
Name : kdpB (CRES_1321) Accession : YP_004605841.1 Strain : Corynebacterium resistens DSM 45100 Genome accession: NC_015673 Putative virulence/resistance : Unknown Product : K+-transporting ATPase ATPase B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 1596543 - 1598783 bp Length : 2241 bp Strand : + Note : High-affinity K+ transport system, ATPase chain B DNA sequence : ATGACTACCTTAAACGCACCCGCGACTGGCAGTTCCGCCAGTTCTGATTCCAGCGCCACGCGCGCAACCACCTCGCATAA TCATGGTGAAAAGCAGTCCGGTGGTGCATTTTCCGCTGCCCAACTGAAAGCTGCTTTGCCCCTTGCCATCAAGAAGATGG ATCCGCGGGTTTTGTACAAGACCCCGGTCATGTTTTTGGTTGAAGTTGGCGCACTTTTCACCTTCGTTCTAGCAATCGCA CACCCCTCCCTATTCACATGGTCGATCACGGTTTGGCTGTGGCTCACTGTGCTTTTCGCTACGCTGGCTGAATCCGTTGC CGAAGGTCGTGGCAAGGCACAAGCTGATGCACTTCGCGCCACCCGCACATCTTCTGATGCTTTGAAGTTCACCGGCACCG AGGTCAATGATTCCCGCCTGGCTCCGGCGTTGGAGAACTCTGGTGCCGGCATCACAGACGTGGCGGAGAAAGTTTCCAGC GAATCACTCCTGCCAGGAGACATCGTTTTGATCAGCGCCGGCAATGTGATCCCAGCCGACGGTGACGTTGTCATGGGCGC TGCCAGTGTGGATGAATCCGCGGTCACGGGTGAGTCCGCACCAGTGATCCGCGAGTCCGGCGGTGACCGTTCCGCGGTCA CCGGCGGCACCCGCGTGCTCTCCGATGCCATCGCCGTGCGCGTTACCAGCAAGCCTGGTGAGTCCTTCATGGACCGCATG ATCGGCCTAGTCGAAGGCGCTGAGCGCAAGAAGACCCCAAATGAACTGGCCCTGGGCACCCTGCTGATCGTGCTGACCAT CATCTTCATGATCGTGGTTCTGGCTTTGGCCCCAATGGCTGCTTTCAACGGTGCCGAACAATCCCCCGTTGTCCTCGTGG CACTACTGGTGTGTTTGATCCCCACCACCATTGGTGCATTGCTGTCGGCCATTGGTATCGCTGGCATGGACCGGCTGGTA CAACACAACGTGTTGGCAATGTCTGGTCGTGCTGTGGAGGCCGCCGGTGACGTGGCAACCCTGCTGCTGGATAAGACCGG CACCATCACCATCGGTGACCGCCAGGCCAGCGAATTCGTCACCGTTGGCGAGACCACACAGGAAGAACTGAACTATGCCT GCCAGCTGTCCTCCCTAGCCGATGAAACCCCAGAAGGCCGGTCGGTCGTACTGTTGGCCCAGAAAGAATCCGGACGATCC ATCCCGGACGAGACTTTCCGCGAAGCCGAATTCATCCCATTCACCGCCCAAACCCGCATGAGTGGCATTCAGCTACCCGC CGGCGCCGGGGAGTATACCGAATGGGCTTCCTCCAATGGCCAGCCCGGCCCACGCAAGATCGTCAAGGGCGCGGCCTCTG AGGTTGCCAAGCTCGTGGCCAACCTGGGAGGCGACGTTCCTGCAACAACCACCGACGTGGTCAACGACATCTCCAACAGC GGTGGCACCGCGCTGGTTGTTGCCGAAATCGCTCTCGACTCCCAGGGTGAAGACCGCGCCGGTCGAGTCTTGGGCGTCAT CCACCTCAAGGACGTCGTCAAGCCAGGCATGACCGAACGTTTCGAACAGTTGCGCAAGATGGGCATCCGCACCGTCATGG TGACCGGTGACAACGCGCTGACTGCTAAGGCCATCGCTGCAGAAGCCGGTGTGGACGACGTGCTTGCAGAAGCCACCCCA GAACAGAAGCTTGAACTCATCCGTAAGGAGCAAGCCAAGGGTCGCCTTGTTGCAATGACCGGTGACGGCACCAACGATGC GCCTGCCCTCGCTCAAGCGGACGTGGGTGTGGCGATGAACACCGGTACCACCGCGGCTAAGGAAGCCGGCAACATGGTGG ACCTCGATTCGGACCCCACCAAGCTGATCGACGTCGTGGCTATCGGTAAGCAGCTTCTGATCACCCGCGGTGCGCTGACC ACATTCAGTATCGCCAACGATATCGCGAAGTATTTCGCGATCATCCCCGCGATGTTCGTAGTGGCCTTCCCCGGTTTGTC TGCACTGAACATCATGCGCTTGCACTCCCCCGAATCCGCGATCCTCTCGGCCGTGATCTTCAATGCGCTGGTCATCATCG CGCTGATTCCGCTGGCTTTGAAGGGCGTGAAGTATCGCGCCGGGTCCGCAGCCTCCCTGTTATCCCGCAACCTCACGATC TTCGGCCTCGGCGGGGTGATCGTTCCATTCATCGGCATCAAGATTATCGACTTGATCATCTCCGGAGTGTTCGGGCTCTA A Protein sequence : MTTLNAPATGSSASSDSSATRATTSHNHGEKQSGGAFSAAQLKAALPLAIKKMDPRVLYKTPVMFLVEVGALFTFVLAIA HPSLFTWSITVWLWLTVLFATLAESVAEGRGKAQADALRATRTSSDALKFTGTEVNDSRLAPALENSGAGITDVAEKVSS ESLLPGDIVLISAGNVIPADGDVVMGAASVDESAVTGESAPVIRESGGDRSAVTGGTRVLSDAIAVRVTSKPGESFMDRM IGLVEGAERKKTPNELALGTLLIVLTIIFMIVVLALAPMAAFNGAEQSPVVLVALLVCLIPTTIGALLSAIGIAGMDRLV QHNVLAMSGRAVEAAGDVATLLLDKTGTITIGDRQASEFVTVGETTQEELNYACQLSSLADETPEGRSVVLLAQKESGRS IPDETFREAEFIPFTAQTRMSGIQLPAGAGEYTEWASSNGQPGPRKIVKGAASEVAKLVANLGGDVPATTTDVVNDISNS GGTALVVAEIALDSQGEDRAGRVLGVIHLKDVVKPGMTERFEQLRKMGIRTVMVTGDNALTAKAIAAEAGVDDVLAEATP EQKLELIRKEQAKGRLVAMTGDGTNDAPALAQADVGVAMNTGTTAAKEAGNMVDLDSDPTKLIDVVAIGKQLLITRGALT TFSIANDIAKYFAIIPAMFVVAFPGLSALNIMRLHSPESAILSAVIFNALVIIALIPLALKGVKYRAGSAASLLSRNLTI FGLGGVIVPFIGIKIIDLIISGVFGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-162 | 57 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-162 | 57 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-148 | 53 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-148 | 53 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-148 | 53 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-148 | 53 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-148 | 53 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-148 | 53 |
