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Name : Flexsi_0841 (Flexsi_0841) Accession : YP_004603073.1 Strain : Flexistipes sinusarabici DSM 4947 Genome accession: NC_015672 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 888473 - 889927 bp Length : 1455 bp Strand : + Note : PFAM: Type II/IV secretion system protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: dap:Dacet_0492 type II secretion system F domain protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system DNA sequence : ATGAAAACTTTTGAGGAGATTAAAGAGTATTATTTTAAATTTCCTGATAGAAGCAATTTTATACCGATTTTTGATGAGGA AGGTAAAAATATTACATTATATTACTGTGACGATGACGGTTACAGAAAAGCCTTCCTGTTTGCCAACACTCTTGATCTGA ATGCGGATTTTCAGGAGACGGATCAAAGTTTTATTCTGGAAAAACTTGAAGATACTTTTGAAGAAAGTTCTGCCGAGTTT GAAGACGGTGAAGAGGATTTTGAAGATGTAAGCGATATTTTGTCGGCTTCATATGAAGATGCACCTGTGATTAAACTGGT GAATCAGATAATTATCAGTGCCGTGAAAGCAGGTGCGAGTGATATTCACTTTGAGACCAGAGCCAATTCTTTTTTGGCAA GGTTTAGAATTGACGGTAAACTGAGGACGTTTAAAAGATACCCCAAATCGCTGCATGAAGCTGTGGTTGCCCGGATAAAA GTTATGGCAATGCTTGATGTAGCCGAAGGGAGAAGACCTCAGGACGGCAGAATAAACGTAAAAGTCGGCAATAGGAACAT TGACATGCGTGTATCTGTAATTCCTTCTATCTATGGTGAAAAAGTCGTTCTGCGAATTCTTGAGAAATCCAGGAATCTGC TCAGCCTTGATGCTGTAGGTATGTCAGAAGAATGGGTAAAACGCTTTGAAGAGCATATAAATAAACCTAACGGAATCATT CTTGTCACAGGTCCCACGGGAAGCGGTAAAACCACAACACTCTACGCTGCTCTTCTTGCTATGAACAGACAGGAAAGGAA TATACTGACAATTGAAGATCCGGTGGAATACGATGTGGACGGTATTACCCAGGTTCAGGTTAACAATACTGTCGGACTTG ATTTTGCAAGTGCAATCAGGTCATTTCTGCGACAGGATCCCGATGTGATACTTGTTGGTGAAATCAGGGATGATGAGACG GCCAAAACAGCTGTTCAGGCTTCACTTACAGGCCATCTTGTGCTTTCCACGCTGCATACCAATGACGCTCCCTCTGCTGT TGCCCGCCTTATTGAAATGGATATTGAGCCGTTTCTTATATCTTCATCACTTTCCCTGGTTGCGGCTCAAAGGCTGGTTA GAAAAAACTGTCCTCACTGCTCTGAAACGGTGAAAGTTGGCGATGATCTTGGTTTGATATTAAAAAAAGAGGGAATAGAG CTTAGTGAATACAAAAAAGGTATGGGCTGTCAGGAATGTTTTGATACCGGCTATAAAGGGAGACTGGCTATATTCGAATT TCTGGAGATTAATGATTCCATCAGAAAGCTTATAAACAGACAGTCCGCAGCTTATGATATACGAGAAGCTGCTAAAAAAA GCGGTTTTAAGCCAATGTTTTACAGTGGAATGGATCTGGTTAGAGAAGGGATTACAACACCTGAAGAAATTTTAGCTACG ACCAGGATAGAATAA Protein sequence : MKTFEEIKEYYFKFPDRSNFIPIFDEEGKNITLYYCDDDGYRKAFLFANTLDLNADFQETDQSFILEKLEDTFEESSAEF EDGEEDFEDVSDILSASYEDAPVIKLVNQIIISAVKAGASDIHFETRANSFLARFRIDGKLRTFKRYPKSLHEAVVARIK VMAMLDVAEGRRPQDGRINVKVGNRNIDMRVSVIPSIYGEKVVLRILEKSRNLLSLDAVGMSEEWVKRFEEHINKPNGII LVTGPTGSGKTTTLYAALLAMNRQERNILTIEDPVEYDVDGITQVQVNNTVGLDFASAIRSFLRQDPDVILVGEIRDDET AKTAVQASLTGHLVLSTLHTNDAPSAVARLIEMDIEPFLISSSLSLVAAQRLVRKNCPHCSETVKVGDDLGLILKKEGIE LSEYKKGMGCQECFDTGYKGRLAIFEFLEINDSIRKLINRQSAAYDIREAAKKSGFKPMFYSGMDLVREGITTPEEILAT TRIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-86 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-87 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Flexsi_0841 | YP_004603073.1 | type II secretion system protein E | VFG0182 | Protein | 2e-88 | 52 |
| Flexsi_0841 | YP_004603073.1 | type II secretion system protein E | VFG2048 | Protein | 1e-87 | 49 |
| Flexsi_0841 | YP_004603073.1 | type II secretion system protein E | VFG1876 | Protein | 1e-81 | 49 |
| Flexsi_0841 | YP_004603073.1 | type II secretion system protein E | VFG2426 | Protein | 9e-74 | 44 |
| Flexsi_0841 | YP_004603073.1 | type II secretion system protein E | VFG0233 | Protein | 7e-71 | 44 |
