Gene Information

Name : Flexsi_0452 (Flexsi_0452)
Accession : YP_004602707.1
Strain : Flexistipes sinusarabici DSM 4947
Genome accession: NC_015672
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 478769 - 479293 bp
Length : 525 bp
Strand : +
Note : PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; COGs: COG0080 Ribosomal protein L11; InterPro IPR006519:IPR020784:IPR020783:IPR000911; KEGG: cni:Calni_1532 LSU ribosomal protein l11p;

DNA sequence : 
ATGGCTAAAGAATGGTATGTTGTTCACACATATTCCGGTTTTGAAAAGCGGGTTAAACAACTGCTGGAAGAAAAAATTAA
AAATGAAAATTTATATGATGATATTGATGATGTGCTTATACCCACAGAAGATGTAGTTGAACTCAAAAAAGGAAAAAAGA
AAATAAGTAAGAAAAAAACTTTTCCGGGGTATATACTTGTTCATATGGAAATGAACACCACTAATTGGCATAAGGTTAAG
TCAATACCTAAAGTAACCGGCTTTGTCGGAGGGATAAATCCTGTTCCGATTCCTGAGCAGGATGTAAAAGCCATGATTGA
TCTGGCAATATCCCAAGCTCCGCGTATGGCTGCTAAATATATGAAAGGCGATACTGTGGAGGTCGTCGACGGACCTTTTT
TAGGCTTTAACGGTGTAGTGGACGAAGTGAACCCTGAGAAAGAAAAAGTAAAAGTAATAGTAAGTATTTTCGGAAGACAG
ACACCTATTGAGCTCGACTATTTACAAGTTAAACGTGTGGGCTAA

Protein sequence : 
MAKEWYVVHTYSGFEKRVKQLLEEKIKNENLYDDIDDVLIPTEDVVELKKGKKKISKKKTFPGYILVHMEMNTTNWHKVK
SIPKVTGFVGGINPVPIPEQDVKAMIDLAISQAPRMAAKYMKGDTVEVVDGPFLGFNGVVDEVNPEKEKVKVIVSIFGRQ
TPIELDYLQVKRVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 2e-34 44
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 2e-34 44