Gene Information

Name : Flexsi_2208 (Flexsi_2208)
Accession : YP_004604398.1
Strain : Flexistipes sinusarabici DSM 4947
Genome accession: NC_015672
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 2364260 - 2366374 bp
Length : 2115 bp
Strand : +
Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011910:IPR002201; KEGG: ddf:DEFDS_1147 ADP-heptose:LPS heptosyltransferase II; PFAM: Glycosyl transferase, family 9; SPTR: ADP-

DNA sequence :
ATGCAGGAATTGTTTAAAAAATTTTCATCCAAAAAAGAAAATCATATAAAAAATCTGATTAATCTACACGAACAAGGCAA
TACCGTTCCGTTCATTGCAAGGTATAGAAAAGAGCAGACGGGCGGGATGGATGAAAATGAAATCAGGGAAATAATTGAAG
AGTATCAGTACCTGCTCAATTTGAAAGCCAGAAAAGATGAAGTGTTGAAAAGGATTGAGGAAAAAGGAAAACTCACGGAT
AAACTGAAAGATTCCATAATAAAAGCGACCACACTGAAAGAAGTGGATGACTTGTATGCCCCTTATAAATCCAAAAGAAA
AACCAAAGCTGACATTGCCAGGGACCAAGGTCTTCAGCCACTGGCAGAATTTGTAAAATATTCTGACGATGACAATGCCG
TATATGCTGAGGGTGAAAAGCATTCAGAGATGAGCGGCATAAGTTCTGCAAATGAAGCGCTGAAGATGGCGTGTGATATC
ATTTCCGAAGAAGTGGGGCATGACCTTGAAGTAAAAAATCGTCTTAGGGAAATTTACAGCATCCAAGGTGTTCTTACCTC
TTCTCTAAAAGAGAAGAAAACAGGGCATTATGAGGATTATTATGATTTTAAGTCGTTTATAAAAGATTTGCCGGAGCACA
GAATTCTGGCAATATTCAGAGGGGAGTCACAAAAGGAACTGAAAATTAAGATTTCCGCTGATGAAGAAGCGTTATACAGC
AGTATTGCCAGTATTCTGCTGAAAAACGGTGTTGAACTGAACACTTTTGTTATTAAATCAATCCGCAGTGCCATGAAGCG
TATGCTTGAACCCTCCATTGAACTTGAAATAAGAAATGAGCTGAAAGAAAAAGCTGAAAAACAGGCGATAAAGGTTTTTG
CCGAGAATCTGAAAAATCTTCTTTTAACGCCGCCTGTAAAAAACAGACGGATTCTGGGGATAGACCCGGCTTTCAGGACA
GGTTGTAAATTTGCCGCTGTGGATGAAAGGGGGATACTGCTTGATTACGGTGTTATTTATCCTACTGAACCGCAAAGTGA
CTATGTAAACAGTAAAAACACACTGCTTGAGGTAATAAAGAAGCACAATGTAAATATTGTAACAATAGGAAACGGCACGG
GCAGCAGGCAGACGGAAGAATTTGTGGACAAGGTTATCCAGGAAGAAAACCTTGACATTACCTATACGATAATCAGTGAA
GCTGGTGCCAGTGTTTATTCTGCAAGCAGCGAAGCGGCAATGGAATTTCCTGATCTTGATGTTACCATAAGAGGCGCTGT
TTCCATTGCCAGAAGGGTTCTGGACCCTTTGGCAGAATTTGTAAAAATTGATCCCAAATCTATAGGGGTTGGGATGTATC
AGCACGATGTAAACCAGAAGCTGCTGCAGAAAACCCTTGATGAAGTGGTTGAGGACGTGGTTAACAATGTGGGGGTTGAT
TTAAATACAGCCAGCCCTTCCCTTTTGAAATATGTTGCTGGTTTGAACCGAAATATTGCGGATAAAATATACAAGATGAG
ACAGGAGAAGAACAAGTTTTCATCCCGTAGAGATCTGTTAAAGGTTGCAGGTATTGGGGAGGACATTTTCAGACAGTGTG
CAGGTTTTCTGAAGATATATGATGGTGAAGAACCTCTGGATAAGATGTTTATCCACCCCGAAAGTTACGATTTTGTATAT
TCGCTTTTAAGCCGTCTGAATGTAAATGTTAAAAACGCCAATATGCTTTCCCTTGCTTTGAAAAATAAGAATATCAGCGA
AATAAAAAATAAATTTAATGTGGGCGAGCTGACGTTTCAGGATATCATTGAAAATCTGCAAAAACCTGATCTGGATATAA
GGGACAATGTAGACCCCCTTGTATTTAAAAAGGGAATTCTTAAGATAGAAGACCTGAAGCCGGGCATGCAGTTGACCGGT
AAAATTTCCAATGTCGTTGATTTTGGTGCTTTTGTGGATATCGGGCTTAAAAATGACGGTCTTGTGCACATTTCGGAAAT
GGCTGAAAGATTTATAAAGCATCCTTCGGAGGTTGTTTCTGTAGGGCAGACCGTTAGTGCAAAAGTGATAGATGTTGATA
AGCAAAGGGGCAGAATCAGTCTTTCTCTGCTTTAA

Protein sequence :
MQELFKKFSSKKENHIKNLINLHEQGNTVPFIARYRKEQTGGMDENEIREIIEEYQYLLNLKARKDEVLKRIEEKGKLTD
KLKDSIIKATTLKEVDDLYAPYKSKRKTKADIARDQGLQPLAEFVKYSDDDNAVYAEGEKHSEMSGISSANEALKMACDI
ISEEVGHDLEVKNRLREIYSIQGVLTSSLKEKKTGHYEDYYDFKSFIKDLPEHRILAIFRGESQKELKIKISADEEALYS
SIASILLKNGVELNTFVIKSIRSAMKRMLEPSIELEIRNELKEKAEKQAIKVFAENLKNLLLTPPVKNRRILGIDPAFRT
GCKFAAVDERGILLDYGVIYPTEPQSDYVNSKNTLLEVIKKHNVNIVTIGNGTGSRQTEEFVDKVIQEENLDITYTIISE
AGASVYSASSEAAMEFPDLDVTIRGAVSIARRVLDPLAEFVKIDPKSIGVGMYQHDVNQKLLQKTLDEVVEDVVNNVGVD
LNTASPSLLKYVAGLNRNIADKIYKMRQEKNKFSSRRDLLKVAGIGEDIFRQCAGFLKIYDGEEPLDKMFIHPESYDFVY
SLLSRLNVNVKNANMLSLALKNKNISEIKNKFNVGELTFQDIIENLQKPDLDIRDNVDPLVFKKGILKIEDLKPGMQLTG
KISNVVDFGAFVDIGLKNDGLVHISEMAERFIKHPSEVVSVGQTVSAKVIDVDKQRGRISLSLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 2e-120 43