Gene Information

Name : Flexsi_1929 (Flexsi_1929)
Accession : YP_004604127.1
Strain : Flexistipes sinusarabici DSM 4947
Genome accession: NC_015672
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2052597 - 2053409 bp
Length : 813 bp
Strand : +
Note : PFAM: IstB-like ATP binding protein; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein

DNA sequence :
ATGATTATTCACGAACGACTCAATGAAGCCTTCCATCAGCTGGGGCTTACTCAAATCCCCGAGATTCTCCACAATCATTC
GGAAGCGGCTTCTAAAGAAGACATATCATATTTGGAATTTTTAGACAAGCTTTTACAGGATGAGCTGGCAGCAAAGCATT
CGAGGTTTATAAAGATGAAGAAGCGGTTATCAAACCTCCCCTTTTACAAGACACTGGATCAGTTTGACTTTGATTTCCAG
CCATCTATTGACAAAAGGCGTATCAACGATTTGGCAACACTACAATTTATTGAACATCGGGAAAATTTAATATTTATGGG
ACCTCCTGGCGTTGGTAAGACCCACCTTGCTGTTGCGTTGGCGCTTGAGGCAATTGCAAAGCGTTATTCTGTATATTTCA
CTACAGCCCATGAGCTCGTGGAAACCCTTCAGGCTGCTTATTATAATAACACAATAAAGCGAAAAATGAAGAAATATACG
AAGCCTGATGTCTTGGTGATTGACGAAATTGGATATCGGCGCATGGAGGATGAAGCCGCACATTTTTTCTTTCAGATAAT
ATCGGAAAGATATGAAAAAGGAGCTGTTATTCTGACCTCCAACAAGTCGTATGGTGCTTGGGGAGAAATATTCGGTGATA
CGGTACTTGCAACTGCAATTCTTGATCGTTTGCTGCACCACTCCAACACTATAAACATCAAGGGAGAGAGTTATCGTATT
AAAGAAAAGAAAAAGGCTGGATTCTTTGAAAGACAGACTAACTCAGATGAGAACAGAAAAAACGATTCTCTGACAGAGGG
TATCACCAAATGA

Protein sequence :
MIIHERLNEAFHQLGLTQIPEILHNHSEAASKEDISYLEFLDKLLQDELAAKHSRFIKMKKRLSNLPFYKTLDQFDFDFQ
PSIDKRRINDLATLQFIEHRENLIFMGPPGVGKTHLAVALALEAIAKRYSVYFTTAHELVETLQAAYYNNTIKRKMKKYT
KPDVLVIDEIGYRRMEDEAAHFFFQIISERYEKGAVILTSNKSYGAWGEIFGDTVLATAILDRLLHHSNTINIKGESYRI
KEKKKAGFFERQTNSDENRKNDSLTEGITK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 8e-36 44
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-46 43
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-46 43
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-46 43
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-46 43
unnamed CAA21402.1 - Not tested HPI Protein 2e-46 43
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-46 43
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 8e-46 43
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-46 43
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-46 43
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-46 43
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 3e-46 43
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Flexsi_1929 YP_004604127.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 4e-36 44
Flexsi_1929 YP_004604127.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 8e-47 43
Flexsi_1929 YP_004604127.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 8e-47 43
Flexsi_1929 YP_004604127.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 4e-46 43
Flexsi_1929 YP_004604127.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 8e-47 43