Gene Information

Name : Flexsi_1874 (Flexsi_1874)
Accession : YP_004604078.1
Strain : Flexistipes sinusarabici DSM 4947
Genome accession: NC_015672
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 1996177 - 1996860 bp
Length : 684 bp
Strand : -
Note : PFAM: ABC transporter; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: yen:YE2493 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Raw score 9.02

DNA sequence : 
ATGGGTCTTATAAAACTGGAGAATGTATCGAAAATTTATAACGACAGGGTGAAAGCCCTGGATAATGTCAGTCTGGAGAT
AATGAAGGGCGACTGGGTGTCTATTATGGGTCCTTCGGGCTCCGGCAAAAGTACTATGTTAAATATTGTCGGATGTATGG
ATACGCCGACGAAAGGGGTGGTTCAAATAGACGGAATCGATATTACAAATCTTAACAAAAAAGATTTGACGGCAATCCGA
AGGGACAAGATCGGACTGATTTTCCAGCAGTTTCATCTTGTCCCTTATCTTACAGCCGTTGAAAATGTAATGCTTGCCCA
ATATTACCATAGTATTTCTGATGAAGATGAAGCTTTGCAGGCGCTGGCAAAAGTGGGTCTGCAGGACAGAACCGAACACT
TTCCGTCGCAGCTTTCCGGCGGAGAGCAGCAGAGGGTATGTATAGCGAGAGCTCTTATAAATTACCCAAAACTGATTTTA
GCTGATGAGCCCACCGGCAATCTCGATGAGGAAAATGAAAATATGGTGATGGATTTGCTAAGTTCTCTTCACAAGCAGGG
TCATACGATTGTTGTAGTAACCCATGATTTAAATGTGTGCAAGAGGGCTGAAAGGGAGATAAACATGCAGCATGGCAAAA
TATTGGGCGAAATGGAGTGTGAAATGGTGTGCAAAACCGGATAA

Protein sequence : 
MGLIKLENVSKIYNDRVKALDNVSLEIMKGDWVSIMGPSGSGKSTMLNIVGCMDTPTKGVVQIDGIDITNLNKKDLTAIR
RDKIGLIFQQFHLVPYLTAVENVMLAQYYHSISDEDEALQALAKVGLQDRTEHFPSQLSGGEQQRVCIARALINYPKLIL
ADEPTGNLDEENENMVMDLLSSLHKQGHTIVVVTHDLNVCKRAEREINMQHGKILGEMECEMVCKTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Flexsi_1874 YP_004604078.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 2e-38 45
Flexsi_1874 YP_004604078.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 5e-43 45
Flexsi_1874 YP_004604078.1 phosphonate-transporting ATPase NC_012469.1.7685735. Protein 2e-34 45
Flexsi_1874 YP_004604078.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 2e-37 43
Flexsi_1874 YP_004604078.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 1e-38 43
Flexsi_1874 YP_004604078.1 phosphonate-transporting ATPase NC_012469.1.7686946. Protein 9e-26 41