Gene Information

Name : Flexsi_1031 (Flexsi_1031)
Accession : YP_004603257.1
Strain : Flexistipes sinusarabici DSM 4947
Genome accession: NC_015672
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1089666 - 1090499 bp
Length : 834 bp
Strand : +
Note : PFAM: Integrase core domain

DNA sequence :
ATGTGTATAGTATTGGGAGTAAGCCGGAGCGGTTATTATAAATGGAGGAATCGAGGAGAAAGCAATCGAATGAAAGAAGA
GAAGATTCTTTATTCAGCAATTTATGATATATACAAAGAGAGCCGTTCTTTGTATGGTAGTCCCCGCATACACAACGGAT
TAAGCAAAAGGGGAATAAAATGCAGCCGCAACAGAGTAGCCAGAATAATGCAGAAGAACGGTATAAGAAGCAAGAGAAGC
AAACGCTACAAAGTCACTACCGATAGCAAACATAAAATGCCTGTTAGTCCCAATATTTTACACAGGGATTTTAGGACAGA
AAAGCCAAACAAGGTATGGGTATCAGATATTACCTACATAGACACTTGTGAAGGATGGCTATATTTAACAACGATATTAG
ATTTATACAATCGTGAAATAGTGGGTTACAGTAGTTCCAACAATTTATACGCATCAGACACTATATTGAGAGCATTCAAG
GAGGCTGGAATAAGACGTAAAGTTTCATCTGGCTTAATATTCCATTCAGACAGAGGATCTCAATACGCAAGTACAGCTTT
TCGTGAAAAATTAAGACATTCCGGTTGTTTACAAAGCATGAGCGGCAGGGGCAATTGTTATGACAATGCAGTTGCTGAGA
GTTTTTTCAAGACACTGAAGAGCGAGTTAATATATCAGGAAGGTAAATACAAAACTCGCAAGGAAGCGAGGATGAGTATT
TTTGAGTATATTGAGTGTTATTATAACTCAAAAAGGACTCATTCAGCTATTGAATACAATACTCCGAGAGAGAAACTGGA
ACTATATTATAAAGAAATGGAGCAATGTGCTTAA

Protein sequence :
MCIVLGVSRSGYYKWRNRGESNRMKEEKILYSAIYDIYKESRSLYGSPRIHNGLSKRGIKCSRNRVARIMQKNGIRSKRS
KRYKVTTDSKHKMPVSPNILHRDFRTEKPNKVWVSDITYIDTCEGWLYLTTILDLYNREIVGYSSSNNLYASDTILRAFK
EAGIRRKVSSGLIFHSDRGSQYASTAFREKLRHSGCLQSMSGRGNCYDNAVAESFFKTLKSELIYQEGKYKTRKEARMSI
FEYIECYYNSKRTHSAIEYNTPREKLELYYKEMEQCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 8e-44 41
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 8e-44 41
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-43 41
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-43 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-46 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-46 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Flexsi_1031 YP_004603257.1 integrase catalytic subunit VFG1706 Protein 8e-44 41