Gene Information

Name : Celgi_0475 (Celgi_0475)
Accession : YP_004599565.1
Strain : Cellvibrio gilvus ATCC 13127
Genome accession: NC_015671
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 517794 - 518636 bp
Length : 843 bp
Strand : +
Note : KEGG: flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence : 
ATGAGCGCGGTGCCGGCGGCCCCGGCGCGCGTCGGGTCGCCCGCGCTGCGCAGGCTCGTGCTCGTGCTCGCGCTCGTCGT
GGGTGCGCTCGTGCTGGGCGTCGTGCTGGCCGGCCCGACGTGGGCCGCGCCCACGCCGCCGACGGACCCGACCGCGCCGA
CGACCCCCGGCGACTCGGTCTCCGTCTCGGTCAACGGCGTCAACGGCACGCCGAGCTCGTCGGTGGTCGTGCTGCTCGCG
ATCACGCTGCTCTCGGTGGCGCCCGCGCTGCTGCTGATGATGACGAGCTTCACCAAGATCTTCGTCGTGCTCGCGTTCAC
GCGGAACGCGCTGGGCCTGCAGGGCGTCCCGCCCAACCAGGTGCTCGCGGGCCTCGCGCTGTTCCTGTCGATGTTCGTCA
TGGCGCCCGTGCTGGGCGACGTCAACGCCGACGCGGTGCAGCCCTACCTGGACGGCGAGCTCACGTTCTCGCAGGCCGTC
GACGTGGGCTCGGGCCCGCTGCGCTCGTTCATGCTCGACCACACGCGTGAGCAGGACCTGGCGCTCCTGACGCGGGCCGC
GGACCAGCCGAACCCCGCGACCCCGGAGGACGTGCCGCTCGCGACGCTCATCCCCGCGTTCCTGCTCTCGGAGCTGCGCT
CGGCGTTCATCATGGGCTTCGTCATCTTCGTGCCGTTCCTGGTCATCGACCTGGTGGTCTCGGCCGTGCTGATGGCGATG
GGCATGATGATGCTCCCGCCCGTCATGATCTCGCTGCCGTTCAAGGTGCTGCTGTTCGTGCTCGTCGACGGCTGGGGCCT
GGTGGTCACGTCGCTCGTCCGCTCGTACGCCGGGGGCGGCTGA

Protein sequence : 
MSAVPAAPARVGSPALRRLVLVLALVVGALVLGVVLAGPTWAAPTPPTDPTAPTTPGDSVSVSVNGVNGTPSSSVVVLLA
ITLLSVAPALLLMMTSFTKIFVVLAFTRNALGLQGVPPNQVLAGLALFLSMFVMAPVLGDVNADAVQPYLDGELTFSQAV
DVGSGPLRSFMLDHTREQDLALLTRAADQPNPATPEDVPLATLIPAFLLSELRSAFIMGFVIFVPFLVIDLVVSAVLMAM
GMMMLPPVMISLPFKVLLFVLVDGWGLVVTSLVRSYAGGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 4e-28 46
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 4e-28 46
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-28 46
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-28 46
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 3e-28 46
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 2e-27 45
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 9e-17 44
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 9e-17 44
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 4e-17 44
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 7e-24 44
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 3e-17 44
lscR AAO18040.1 LscR Virulence TTSS locus Protein 7e-24 44
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 9e-23 43
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 1e-22 43
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 1e-22 43
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 1e-17 42
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 1e-17 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 4e-22 42
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 4e-22 42
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 4e-22 42
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 1e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Celgi_0475 YP_004599565.1 flagellar biosynthetic protein FliP VFG1259 Protein 1e-48 55
Celgi_0475 YP_004599565.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-47 54
Celgi_0475 YP_004599565.1 flagellar biosynthetic protein FliP VFG2016 Protein 3e-45 53
Celgi_0475 YP_004599565.1 flagellar biosynthetic protein FliP VFG0394 Protein 5e-25 46
Celgi_0475 YP_004599565.1 flagellar biosynthetic protein FliP VFG0044 Protein 3e-26 45
Celgi_0475 YP_004599565.1 flagellar biosynthetic protein FliP VFG0519 Protein 5e-23 43
Celgi_0475 YP_004599565.1 flagellar biosynthetic protein FliP VFG0188 Protein 4e-24 43