Gene Information

Name : Celgi_0460 (Celgi_0460)
Accession : YP_004599550.1
Strain : Cellvibrio gilvus ATCC 13127
Genome accession: NC_015671
Putative virulence/resistance : Virulence
Product : ATPase, FliI/YscN family
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 503063 - 504376 bp
Length : 1314 bp
Strand : +
Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: type III secretion system ATPase, FliI/YscN; SMART: AAA ATPase

DNA sequence :
ATGAGCACGCTCACCCTGCCCCGCCCCGTCCTGGACGCGGCCCGGCCGCAGCCGGTGGGCGTCCTGCGCGCGGTCGTCGG
GCTCACGCTCGAGGTCGTCGGGACGCGGTCCGCGGTCGGCGACCTGGTGCGCGTGGGTGACGGCCCGGACGCCGTGCTCG
CGGAGGTCGTGGCCGCCACCGGCGGGTCCGCGCACTGCATGCCCCTGGGCGCGACGCGCGGCCTGGGTGCGGGCCTGCCG
GTCCGCCCCGCGGGCGCGCTGCGCGTCCCCGTGGGCTCGGGCCTGCTCGGCCGCGTGCTCGACGGCTTGGGCCGCCCGAT
CGACGGCAAGGGCCCGCTGCGCGCGCAGGCGTGGGTGCCGGTCGACGGGACCGCACCGCACCCTCTCGAGCGAGCGCGCG
TCGACACGCCGCTCGACCTGGGTGTGCGCGTGCTGGACACGCTCGTGACGGCCGGGCGCGGTCAGCGCCTCGGCCTGTTC
GCCGGCTCGGGCGTCGGCAAGTCGAGCCTGCTGTCGATGATCGCGCGCGGCACGGAGGCCGAGGTCTCCGTCATCGCGCT
CGTCGGCGAGCGCGGGCGTGAGGTGCGCGAGTTCCTCGAGGACGACCTCGGCCCCGAGGGGCTCGCCCGGTCCGTCGTCG
TGATCGCGACGTCCGACGAGCCCCCGCTCGTGCGGCTGCGGTCGGCGTTCGTCGCGACGCGCATCGCCGAGCACCTGCGT
GACGAGGGCCGCCACGCGGTCCTGATGATGGACTCCCTCACGCGTGTCGCGATGGCCCAGCGCGAGATCGGCCTGTCCGT
GGGTGAGCCGCCCGCGACGCGCGGCTACCCGCCGAGCACGTTCGCGCTGCTCGCGCAGCTCCTGGAGCGTGCGGGCACCG
GCCCGCGCGGCTCGGTCACGGGTCTGTACACCGTGCTCGTGGACGGCGACGACCACAACGAGCCGATCGCCGACGCGGCA
CGTTCGATCCTCGACGGGCACGTGGTCCTCGACCGCCGGCTCGCCGTGGCCGGGCACTTCCCGAGCGTCGACGCGCTCGG
CTCGATCAGCCGGGTCGCGTCGCGCGTCACGACGGGTGAGCAGCGGGCCGCGGCCCAGCGGCTGCGCTCGGTCATGGCGG
CCCGGCGCGCCGCGCAGGACCTGCTCGACGTCGGCGCGTACGTGGCCGGCACCAACCCCCTGGTCGACGCGGCCGTCACG
CACGGCGCGCAGATCGACGCCTTCCTGCAGCAGGGCATGGACGAGTCCGCGCCCGCCGCTCAGTCCTGGGAGCGCCTCGG
CGCCCTCGTGCACACCCTGGGAGAGCTGCCATGA

Protein sequence :
MSTLTLPRPVLDAARPQPVGVLRAVVGLTLEVVGTRSAVGDLVRVGDGPDAVLAEVVAATGGSAHCMPLGATRGLGAGLP
VRPAGALRVPVGSGLLGRVLDGLGRPIDGKGPLRAQAWVPVDGTAPHPLERARVDTPLDLGVRVLDTLVTAGRGQRLGLF
AGSGVGKSSLLSMIARGTEAEVSVIALVGERGREVREFLEDDLGPEGLARSVVVIATSDEPPLVRLRSAFVATRIAEHLR
DEGRHAVLMMDSLTRVAMAQREIGLSVGEPPATRGYPPSTFALLAQLLERAGTGPRGSVTGLYTVLVDGDDHNEPIADAA
RSILDGHVVLDRRLAVAGHFPSVDALGSISRVASRVTTGEQRAAAQRLRSVMAARRAAQDLLDVGAYVAGTNPLVDAAVT
HGAQIDAFLQQGMDESAPAAQSWERLGALVHTLGELP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-80 51
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-73 51
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-81 51
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-81 51
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-78 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-77 49
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 8e-79 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-78 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 8e-79 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-78 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 4e-79 49
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-69 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-69 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-69 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-69 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-69 47
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-68 47
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-62 47
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-62 47
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 8e-63 47
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-64 46
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-64 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-63 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 8e-57 45
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 5e-63 45
invC AAS66861.1 InvC Not tested SSR-2 Protein 2e-58 45
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 7e-59 44
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 2e-58 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Celgi_0460 YP_004599550.1 ATPase, FliI/YscN family VFG0048 Protein 6e-83 53
Celgi_0460 YP_004599550.1 ATPase, FliI/YscN family VFG1254 Protein 2e-90 52
Celgi_0460 YP_004599550.1 ATPase, FliI/YscN family VFG2331 Protein 3e-82 52
Celgi_0460 YP_004599550.1 ATPase, FliI/YscN family VFG0192 Protein 4e-84 51
Celgi_0460 YP_004599550.1 ATPase, FliI/YscN family VFG2144 Protein 3e-80 49
Celgi_0460 YP_004599550.1 ATPase, FliI/YscN family VFG0390 Protein 2e-78 49
Celgi_0460 YP_004599550.1 ATPase, FliI/YscN family VFG2499 Protein 1e-79 49
Celgi_0460 YP_004599550.1 ATPase, FliI/YscN family VFG0515 Protein 6e-70 47
Celgi_0460 YP_004599550.1 ATPase, FliI/YscN family VFG2459 Protein 6e-61 45