Gene Information

Name : Celgi_0280 (Celgi_0280)
Accession : YP_004599371.1
Strain : Cellvibrio gilvus ATCC 13127
Genome accession: NC_015671
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 308239 - 310830 bp
Length : 2592 bp
Strand : +
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: ATP-dependent chaperone ClpB; SMART: AAA ATPase

DNA sequence :
GTGGACGCGAAGTTCACCACCCGCTCGCAGGAGGCGCTGGGCAGCGCGTTCCAGTCCGCGAGCGCCGCCGGCAACCCGCA
GCTGGAGCCCGCGCACATCCTCGACGCACTGCTGCAGCAGCAGGGCGGCGTCGCCAACGGGCTCCTCGACGCGGTCGGCG
CGGACCGCGCGAGCCTGGGCCGTGCGGTGCGGGGCATCCTGGTCAACCTCCCGTCGTCGTCGGGCGCCACGGTCTCCCAG
CCGCCCGCCTCACGCGCGACGACGGCGGCGCTGCTGGCCGCCAACGACGAGGCGCGCACGCTGGGCGACGACTACGTGTC
CACCGAGCACCTGCTGATCGGCCTCGCGGCCGGGCAGTCGGGCGTCGCGGACGCGCTGCGCGGTGCGGGTGCCTCGCGCG
ACGCGCTCCTGGCGGCGCTGCCGGACGTCCGCGGCACCGGCCGTGTGACCACGGCCAACCCCGAGGGCACGTACAAGGCC
CTCGAGCAGTACGGGCTGGACCTCACGCAGCGCGCCGCGGACGGCAAGCTGGACCCGGTGATCGGCCGCGACGCGGAGAT
CCGGCGTGTGGTGCAGGTGCTCTCGCGCCGCACCAAGAACAACCCCGTGCTGATCGGCGAGCCCGGCGTGGGCAAGACCG
CCGTGGTCGAGGGCCTCGCGCAGCGTATCGTCGCGGGCGACGTGCCGGAGTCCCTGCGCGGCAAGAAGCTCGTCTCGCTG
GACCTCGCCTCGATGGTCGCGGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGCCTCAAGGCCGTGCTGGCCGAGATCAC
CGCGTCCGACGGGCAGGTGGTCACGTTCATCGACGAGCTGCACACCGTCGTCGGCGCGGGGGCGGGCGGCGAGGGCGCGA
TGGATGCGGGCAACATGCTCAAGCCCATGCTCGCGCGCGGCGAGCTGCGCCTGGTGGGCGCCACCACGCTCGACGAGTAC
CGCGAGAACATCGAGAAGGACCCGGCGCTCGAGCGGCGGTTCCAGCAGGTGTTCGTCGGCGAGCCGTCGGTCGAGGACAC
CGTGGCGATCCTGCGCGGGCTCAAGGAGCGGTACGAGGCGCACCACAAGGTCACCATCTCGGACGCGGCGCTCGTCGCGG
CGGCGGCGCTGTCCGACCGGTACATCACGGGCCGCCAGCTGCCGGACAAGGCGATCGACCTGGTCGACGAGGCCGCGTCC
CGGCTGCGCATGGAGCTCGACTCCTCGCCCATCGAGATCGACGAGCTGCAGCGCGCGGTCACGCGCCTCGAGATGGAGGA
GGTCGTGCTCGCGGAGTCCGACGACCCCGGCTCGCGCGAGCGCCTCGAGCGCCTGCGCCAGGACCTGGCGGACCGTCGTG
AGGACCTGGCCGCGCTCAACGCCCGGTGGGAGAAGGAGAAGGCCGGCCACAACCTGGTGGGTGACCTCAAGGCACGCCTG
GACACGCTGCGCTCGGACGCCGAGCGGCTGCAGCGCGAGGGCGACCTGGAGAAGGCCGCGCGGATCCTCTACGGAGAGAT
CCCCACGCTCCAGCAGCAGATCCAGCAGGCCGAGGCGTCGGAGGCCGCGGCCGACGACGTGGTCGAGGGCCCGCCGATGA
TCGCCGAGAAGGTGGGGCCCGACGAGATCGCCGAGGTGGTCTCGGCGTGGACCGGCATCCCCGCGGGCCGGATGCTCGAG
GGCGAGACCGCGAAGCTGCTGCGCATGGAGGAGGTGCTGGGTGCGCGCCTGATCGGGCAGCACCGAGCGGTCGCCGCGGT
CTCCGACGCGGTGCGCCGGGCGCGCGCGGGCATCTCCGACCCGGACCGTCCCACGGGCTCGTTCCTGTTCCTGGGTCCCA
CGGGCGTCGGCAAGACCGAGCTCGCCAAGGCGCTCGCGGACTTCCTGTTCGACGACGAGCGCGCGATGGTGCGCATCGAC
ATGTCCGAGTACGCCGAGAAGCACTCGGTGGCCCGGCTCGTCGGCGCGCCCCCCGGGTACGTGGGGTACGAGGAGGGCGG
GCAGCTGACCGAGGCCGTGCGGCGCCGTCCGTACTCGGTGGTGCTGCTCGACGAGGTGGAGAAGGCGCACCCCGAGGTGT
TCGACGTCCTGCTGCAGGTGCTGGACGACGGTCGCCTGACCGACGGCCAAGGTCGGACGGTCGACCTGCGGAACGTCATC
CTCATCCTCACGTCCAACCTGGGCTCGCAGTTCCTGGTGGACCCGCGGCTCTCGCAGGACGAGAAGCGCGACGCCGTGAT
GGCCGCGGTGCGCTCGGCGTTCAAGCCGGAGTTCCTCAACCGCCTGGACGACGTGGTGCTGTTCGACCCGCTGTCCATCG
AGGAGATCGGGCACATCGTCGAGCTGCAGGTCGAGGCGCTCGGGCGCCGCCTGCAGGACCGCCGGCTCACGCTCGACGTG
ACGCCCGCGGCGCGCGAGTGGCTGGCCCTCGAGGGCTACGACCCCGCGTACGGTGCGCGACCGCTGCGCCGCCTGGTGCA
GCGGCAGATCGGGGACAACCTGGCGCGCGCGCTCCTGGCGGGCGAGGTGCACGACGGTCAGACGGTGCACGTCGACCGCG
GCGTCGACGGCCTGGTGGTCACCTCCACCTGA

Protein sequence :
MDAKFTTRSQEALGSAFQSASAAGNPQLEPAHILDALLQQQGGVANGLLDAVGADRASLGRAVRGILVNLPSSSGATVSQ
PPASRATTAALLAANDEARTLGDDYVSTEHLLIGLAAGQSGVADALRGAGASRDALLAALPDVRGTGRVTTANPEGTYKA
LEQYGLDLTQRAADGKLDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPESLRGKKLVSL
DLASMVAGAKYRGEFEERLKAVLAEITASDGQVVTFIDELHTVVGAGAGGEGAMDAGNMLKPMLARGELRLVGATTLDEY
RENIEKDPALERRFQQVFVGEPSVEDTVAILRGLKERYEAHHKVTISDAALVAAAALSDRYITGRQLPDKAIDLVDEAAS
RLRMELDSSPIEIDELQRAVTRLEMEEVVLAESDDPGSRERLERLRQDLADRREDLAALNARWEKEKAGHNLVGDLKARL
DTLRSDAERLQREGDLEKAARILYGEIPTLQQQIQQAEASEAAADDVVEGPPMIAEKVGPDEIAEVVSAWTGIPAGRMLE
GETAKLLRMEEVLGARLIGQHRAVAAVSDAVRRARAGISDPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRID
MSEYAEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDLRNVI
LILTSNLGSQFLVDPRLSQDEKRDAVMAAVRSAFKPEFLNRLDDVVLFDPLSIEEIGHIVELQVEALGRRLQDRRLTLDV
TPAAREWLALEGYDPAYGARPLRRLVQRQIGDNLARALLAGEVHDGQTVHVDRGVDGLVVTST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-97 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-96 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-96 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Celgi_0280 YP_004599371.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-100 43
Celgi_0280 YP_004599371.1 ATP-dependent chaperone ClpB VFG2076 Protein 7e-107 43