Gene Information

Name : Celgi_1813 (Celgi_1813)
Accession : YP_004600888.1
Strain : Cellvibrio gilvus ATCC 13127
Genome accession: NC_015671
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 1962069 - 1963742 bp
Length : 1674 bp
Strand : -
Note : KEGG: type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase

DNA sequence :
GTGAAGCAGCTGGGCGAGATCCTGCTCGAGGAAGGTCTGGTCACCGAGGGGCAGCTCCTGGCCGCGCTCGACGAGCAGCT
GGCCTCGGGCACGTCGCTCGGTCGCACGCTCGTCGAGCTCGGCATGCTGACCGAGAACCAGCTCGTCGCCGCGCTCGCCT
CGCAGGTCGGCATGCAGTTCATCGACCTCGACGAGCACCCGGTGGACCGCGCAGCCGTCGCGATGGTGCCGGGTGCGCTC
TGCCGCCGGTACACCGTCCTGCCGATCGCGGTCCAGAACGGCGTCCTCATCCTCGCGACCGCCGATCCCGGCAACGTCAT
GGCGGTCGACGACGTGCGCACCGTCTCCGGCATGCCGGTGACCCCGGTGATCTCCACGTACGACAACGTGGTGCGAGCGA
TCGACCGGTTCGTTCGCGCCGACGGCGAGATGGAGAACCTCTCGTCCGCGTTCGAGGAGGCGCAGGCCGAGCCTGAGGCC
GACCTGTCGAAGATGGGCGACTTCGTCGACGACGACGCGCCCATCGTCCGGTACGTCAACCTGCTCGTCACGCAGGCGAT
CACCGACCGCGCCTCGGACATCCACATCGAGCCGACCGAGCACGACCTGCGGGTCCGTTACCGCATCGACGGCGTGCTCC
ACGAGACGCAGCGCTCACCCAAGAACATCACGGGCGGCGTGATCTCGCGCGTGAAGATCATGAGCGACATCGACATCGCG
GAGAAGCGCAAGCCGCAGGACGGCCGCATGTCCGTGGTGCACAACGGCCGCAAGATCGACCTCCGCGTCGCGACGCTGCC
CACGGTCTGGGGCGAGAAGATCGTCATGCGAATCCTCGACAACTCCACGGCCAGCCTCGACCTGCGGGACCTGTCCTTCC
TCGACCACAACTTCGAGTCGTACCAGGAGTCGTACACCAAGCCGTACGGCATGATCCTGGTCACCGGCCCGACCGGTTCG
GGCAAGTCGACCACGCTGTACGCGACGCTCAACGCGGTCTCCAAGCCCGACATCAACGTCATCACGGTCGAGGACCCCGT
CGAGTACCGGCTCGCGGGCATCAACCAGGTGCAGGTCAACCCGAAGGCGGGGCTCACGTTCGCGGCCGCGCTGCGCTCGA
TCCTGCGGTCCGACCCGGACGTCGTGCTCCTCGGTGAGATCCGTGACCACGAGACCGCGCAGATCGCGATCGAGGCGGCG
CTCACCGGCCACCTGGTGCTCTCGACGCTGCACACCAACGACGCACCCTCGGCGGTCACGCGCCTGACGGAGATGGGCAT
CGAGCCCTTCCTCGTCGGGTCCGCGCTCGACTGCGTGGTCGCGCAGCGACTCGCGCGCCGCCTGTGCCCGAAGTGCAAGG
TCGCCTACCAGCCCTCCCCGGAGGAGATGGAGGCCGCCCGATTCCCGTGGGTCCCGGGCGAACCGCTGCCCGAGCTGTTC
CGTCCCGGCGGGTGCACCTCGTGCTCGAAGACGGGCTACAAGGGCCGTCTCGCGCTGCACGAGGTCATGCGTGTCACCGA
GGAGATCGAGCGGCACGCGGTGGCGCACTCGTCCGCCGCCGACATCGCGGCCACCGCGGTCAAGCAGGGCATGACGACGC
TCCGCAACGACGGCTGGTACAAGGTCGCGCTGGGCCAGACGTCGATCGAGGAGATCCTGCGCGTCGTCGCGTGA

Protein sequence :
MKQLGEILLEEGLVTEGQLLAALDEQLASGTSLGRTLVELGMLTENQLVAALASQVGMQFIDLDEHPVDRAAVAMVPGAL
CRRYTVLPIAVQNGVLILATADPGNVMAVDDVRTVSGMPVTPVISTYDNVVRAIDRFVRADGEMENLSSAFEEAQAEPEA
DLSKMGDFVDDDAPIVRYVNLLVTQAITDRASDIHIEPTEHDLRVRYRIDGVLHETQRSPKNITGGVISRVKIMSDIDIA
EKRKPQDGRMSVVHNGRKIDLRVATLPTVWGEKIVMRILDNSTASLDLRDLSFLDHNFESYQESYTKPYGMILVTGPTGS
GKSTTLYATLNAVSKPDINVITVEDPVEYRLAGINQVQVNPKAGLTFAAALRSILRSDPDVVLLGEIRDHETAQIAIEAA
LTGHLVLSTLHTNDAPSAVTRLTEMGIEPFLVGSALDCVVAQRLARRLCPKCKVAYQPSPEEMEAARFPWVPGEPLPELF
RPGGCTSCSKTGYKGRLALHEVMRVTEEIERHAVAHSSAADIAATAVKQGMTTLRNDGWYKVALGQTSIEEILRVVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 6e-87 47
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-87 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Celgi_1813 YP_004600888.1 type II secretion system protein E VFG0233 Protein 8e-84 48
Celgi_1813 YP_004600888.1 type II secretion system protein E VFG2426 Protein 8e-76 47
Celgi_1813 YP_004600888.1 type II secretion system protein E VFG2048 Protein 2e-88 47
Celgi_1813 YP_004600888.1 type II secretion system protein E VFG0112 Protein 5e-93 41