Gene Information

Name : Halxa_1621 (Halxa_1621)
Accession : YP_004596132.1
Strain : Halopiger xanaduensis SH-6
Genome accession: NC_015666
Putative virulence/resistance : Virulence
Product : Iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 936471 - 937424 bp
Length : 954 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: htu:Htur_0305 ABC transporter related protein; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGACGGATCCGAGTACCATGACCGACACGAACGTCGACCCGGACGCCGACGCATCGACAGGGCACAGCGCACGCGACGC
GGACGCCGAGACGAACCTCGACATCGCCGACACCGCTGCCGATGGCAAGACGACGACCGGCGGCCACGACGACGACGCCA
AGAGCGCCCTCGTCGGCGACAGCCTCGAGTTGAGCTACCCCGGCAGCGACGAGACCATCGTCGACTGTACGCGCCTGGAC
GTGCCGGAGGGCGAGATCACCGCCCTCGTCGGCCCCAACGGCAGCGGCAAGAGCACGATGCTGAAGGCGCTCTCGAAGCA
CCTCGAGCCGGATACGGGCGTCGTTCGGTTGCGCGGGGAGGACCTCCAGTCGTTCGATCGGCCCGAACTCGCGCGCGAAC
TCGGCCTCCTCTCCCAGGAGAACGACTCGGTCAGCGGGATCACCGTCGAGGACCTGGTCTACCACGGTCGCTATCCGCAC
CGCGGATTCTTCGACAGCGTCTCCCCGGAGGACCGCGAGGCGGTCGAACGCGCCCTCGAGTTGGCAGGCGTCGAGCACCT
CCGCGATTCCGAACTCGGCCAACTCAGCGGCGGCCAGAAACAACTCGCCTGGATCGCGATGGTGCTGGCCCAGGATACGG
ACATCCTCCTGCTGGACGAGCCGACGACCTTCCTCGATCTCCACCACCAGTTCCGCGTCCTCGAGACGATCCGCCAGCTG
AACGAGGAGAAGGGCGTCACCGTCGCGGTCGTGCTCCACGACATTTCCCAAGCCGCGCGGTTCGCGGACTACCTCATCGC
GATGCGCGACGGCGAACTGTACGACTGGGGCCCGCCGGAGGAGATCGTCACCGAGCAGTTGCTCGCGGACGTGTTCGAGG
TCGAGGCGACCGTCGCCTACGATCCCGAACTGCAGGTGCTCCCCAAGCGAGCGCTGCAATCTGACAACGAGTAA

Protein sequence :
MTDPSTMTDTNVDPDADASTGHSARDADAETNLDIADTAADGKTTTGGHDDDAKSALVGDSLELSYPGSDETIVDCTRLD
VPEGEITALVGPNGSGKSTMLKALSKHLEPDTGVVRLRGEDLQSFDRPELARELGLLSQENDSVSGITVEDLVYHGRYPH
RGFFDSVSPEDREAVERALELAGVEHLRDSELGQLSGGQKQLAWIAMVLAQDTDILLLDEPTTFLDLHHQFRVLETIRQL
NEEKGVTVAVVLHDISQAARFADYLIAMRDGELYDWGPPEEIVTEQLLADVFEVEATVAYDPELQVLPKRALQSDNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-48 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-45 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-47 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-47 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-47 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-47 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-39 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-44 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-44 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-44 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-44 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-44 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-44 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halxa_1621 YP_004596132.1 Iron-chelate-transporting ATPase BAC0164 Protein 7e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halxa_1621 YP_004596132.1 Iron-chelate-transporting ATPase VFG0925 Protein 3e-52 47
Halxa_1621 YP_004596132.1 Iron-chelate-transporting ATPase VFG1042 Protein 6e-40 43