Gene Information

Name : Halxa_1435 (Halxa_1435)
Accession : YP_004595947.1
Strain : Halopiger xanaduensis SH-6
Genome accession: NC_015666
Putative virulence/resistance : Virulence
Product : Iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 746352 - 747260 bp
Length : 909 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: hut:Huta_2191 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGAGTGGGACACACACATCTCCTGAGACGGACGCCGACCGCAATCGCGCAACGGACGCCGAGGAGCCGACCGACGAGAA
TCCACACCTGACCGGCACCGACCTACGGATCGGCTATCCGGAGGCCGACGAACTGGTCATTGACGGCGAGTCGCTGAGCG
TACCCGAGGGGCAGGTGACGGCGCTGATCGGCCCCAACGGCAGCGGCAAGAGCACGCTGCTGAAGGGGATCGCCCGACAG
GTTTCCCTCGAGTCGGGCTCGGTGCTGCTCGACGGATCGGATATCCACGAGCTCGAGAAGAAGGAGTTCGCCCGGAAGCT
GGGGCTGCTCTCCCAGGAGAACGTCTCGCCGGGCTCGCTGACCGTCGAGGAACTCGTCTTCCACGGCCGGTACCCCCACC
GGGGCTTCTTCGAGTCCACAACTGACGAGGACGAGGCCGCCGTCGATCGCGCGATCGCGCTGGCCGGCGTCGACCACCTG
CGGGAAACCGAACTCGACAGCCTCAGCGGCGGCCAGAAGCAACTCGTCTGGATCGCGATGGTGCTGGCCCAGGAGACCGA
CGTGCTGTTGCTCGATGAGCCGACCACCTTCCTCGACGTCCACCACCAGCTCGAGGTCATGGAGATCGTCGAGGCGCTGC
GCGATTACAGCGACGTGACGATCGTCCTCGTGCTCCACGACATCGAGCAGGCGGCCCGCTACGCCGACTACCTGCTGGCG
CTGGACGGCGGCTCGATCTACGCCCGCGGCCCGCCCGAGGAAGTTATCACCGAGGAACTGCTCGCGGACGTCTTCGAGAT
CGAAGCGGCGGTCGAATACGGCGGCGAGACCGGCCCCGACATCACGCCGCTCGGGCCGCTTCACGACGAGTCGACCGACG
ACGTGCGGCGGGAGATCCTGCGTCGCTGA

Protein sequence : 
MSGTHTSPETDADRNRATDAEEPTDENPHLTGTDLRIGYPEADELVIDGESLSVPEGQVTALIGPNGSGKSTLLKGIARQ
VSLESGSVLLDGSDIHELEKKEFARKLGLLSQENVSPGSLTVEELVFHGRYPHRGFFESTTDEDEAAVDRAIALAGVDHL
RETELDSLSGGQKQLVWIAMVLAQETDVLLLDEPTTFLDVHHQLEVMEIVEALRDYSDVTIVLVLHDIEQAARYADYLLA
LDGGSIYARGPPEEVITEELLADVFEIEAAVEYGGETGPDITPLGPLHDESTDDVRREILRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-44 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-44 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-44 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-44 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-41 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-44 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-44 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-44 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-44 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-44 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halxa_1435 YP_004595947.1 Iron-chelate-transporting ATPase BAC0164 Protein 1e-41 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halxa_1435 YP_004595947.1 Iron-chelate-transporting ATPase VFG1042 Protein 1e-41 45
Halxa_1435 YP_004595947.1 Iron-chelate-transporting ATPase VFG0925 Protein 4e-48 44