Gene Information

Name : Halxa_4076 (Halxa_4076)
Accession : YP_004598560.1
Strain : Halopiger xanaduensis SH-6
Genome accession: NC_015666
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 3429916 - 3431103 bp
Length : 1188 bp
Strand : +
Note : KEGG: nmg:Nmag_1099 cystathionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme

DNA sequence :
ATGACTGACGAGCACGACGGCAGCTCCGAGCCCGACGACCGTCGGATCGAGACCCGGTCGATCCACGCCGGACAGGACCC
CGACGAGGAGACCGGCGCGCTGATGACGCCGATCCACGCTAATTCGACGTACGAACAGGACGCGCCCGGCGAGCACCGCG
GCTACGAGTACTCCCGCACCGGCAACCCCACGCGAACCGACCTCGAGGCGAACCTCGCGAGCCTCGAGAACGCCGAGTAC
GGCCGCGCGTTCGCCAGCGGCATGGCCTCCATCAACACGGTCCTGAACCTGCTCGAGGCGGGCGACCACGTCGTCACCGG
AAACGACGTCTACGGCGGCACCCACCGCATCTTCACGCAGGTCTACGAGGACTACGACCTCGAGTTTTCGTTCGTCGATA
TGACCGACCTCGAGGCCATCGAGTCGGCGTTCCAGGAAAACACGGAACTGCTTTGGCTCGAGACGCCCACCAATCCCCTC
CTGTCGATCGTCGACATCGAGGGCGCGGCGGAGATCGCCCACGAGCACGACGCGCTCTGTGCGATCGACAACACCTTCGC
GACGCCGTACCTCCAGCGCCCGCTCGATTTGGGCGCGGACATCGTCTCCCACTCGCTGACCAAGTATCTGGGGGGCCACT
CCGACATCGTCGGGGGCGCCCTGCTGACGAACGACGAAGAACTGGACGAGGAGTTCGGCTTCTACCAGAACGCCGTCGGC
GCGACGCCGGGTCCCTTCGAGTCGTTCCTCGTCCTCCGCGGGACGAAGACCCTTCCCGTCCGGATGGATCGCCACTGCGA
AAACGCTCAGGCGATCGCCGAGTGGCTCGAGGACCACCCCGACGTCGACCGCGTCTACTACCCCGGCCTCGAGTCCCATC
CGGGCCACGAGATCGCCGCCGAGCAGATGGACGACTTCGGCGGCATGGTGAGCTTCGAACTCGACGCCACCATGGAGGAG
GCCGGCGAGGTCGTTTCGAACACCGAGGTCTTCACCCTCGCGGAGAGCCTCGGCGGCGTCGAGAGCCTGATCGAACAGCC
GGCGCCGATGACCCACGCCGCGATCCCTCGTGAAGAACGGATCGAGGCCGGCCTCGAGGACAGCCTCATTCGCGCGAGCG
TCGGCATCGAACACGTCGACGACCTGATCGCCGATCTCGAGCAGGCGATCGACGCGGCGCTCGAGTAG

Protein sequence :
MTDEHDGSSEPDDRRIETRSIHAGQDPDEETGALMTPIHANSTYEQDAPGEHRGYEYSRTGNPTRTDLEANLASLENAEY
GRAFASGMASINTVLNLLEAGDHVVTGNDVYGGTHRIFTQVYEDYDLEFSFVDMTDLEAIESAFQENTELLWLETPTNPL
LSIVDIEGAAEIAHEHDALCAIDNTFATPYLQRPLDLGADIVSHSLTKYLGGHSDIVGGALLTNDEELDEEFGFYQNAVG
ATPGPFESFLVLRGTKTLPVRMDRHCENAQAIAEWLEDHPDVDRVYYPGLESHPGHEIAAEQMDDFGGMVSFELDATMEE
AGEVVSNTEVFTLAESLGGVESLIEQPAPMTHAAIPREERIEAGLEDSLIRASVGIEHVDDLIADLEQAIDAALE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-85 49
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-86 49
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-68 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halxa_4076 YP_004598560.1 cystathionine gamma-lyase BAC0207 Protein 2e-69 43