Gene Information

Name : Halxa_3347 (Halxa_3347)
Accession : YP_004597838.1
Strain : Halopiger xanaduensis SH-6
Genome accession: NC_015666
Putative virulence/resistance : Virulence
Product : ABC transporter integral membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2682570 - 2683583 bp
Length : 1014 bp
Strand : +
Note : PFAM: Bacterial transport system permease; KEGG: htu:Htur_1831 transport system permease

DNA sequence : 
GTGCCGCAGCCGGGCCGAATTATCTCGTGGACGGTCGCGCTCGCAGCGCTGCTCGTCGTCGTCGTCGTCGGCAGCGCCAT
GTTCGGTCCGGTCCGGATCGACGCGCCGACGGTCGCTCGAGCGATTTTGAATCGGGCCGGCGCCGGCCCGTACGAGGTCT
CCGCGGCCCACCAGGCGATCGTCGTCGACGTGCGACTCCCGCGGATCGCGCTGGCCGCCGTCGTCGGCTTCGCGCTCGCG
GCCGCGGGGACGGTCATGCAGGGCTTCTTTCGAAATCCGCTCGCCGATCCGTCGATCATCGGCGTCTCCTCTGGCGCGGC
GGCCGGCGCGGTCGCCGCGATCGCGTTTCCGGCGCTCGTGCCGTTCGGCAGCCTCCACCTCGCGGCGTTCGTCGGCGCGC
TGGCGACGGCGTTTCTCGTCTACGCGATCGCGACCGACGGCGGGCGGACGCCGGTCGCAACCTTGCTGCTCGCGGGCGTC
GCCGTGCAGGCCTTTCTCGGCGCGGTGATCTCCTACATGCTCGTCCACAGCGGCGACAGCCTCCGCGAGGCCGTCGTCTG
GCTGATGGGCCACCTCCACAACAGCACCTGGGGCGACGTTCGCTTCGCCCTCCCGTTCGCGGTCGTCGGCGTGCTCGCGC
TCTGTGCGTTCGCCCGCGACCTGAACGTCCTCCTGCTCGGCGAGGAGGACGCCCACCACCTCGGGGTCGACGTCGAGCGG
ACCAAACTGCTCCTGCTCGCGTTGGCCAGCGTCGTCACCGCCGCCGGCGTCGCCGTCGCGGGCGTCATCGGCTTCGTCGG
CCTCGTCGTCCCCCACATCATGCGGCTGCTCGTCGGCCCCGACCACCGCATCCTGCTGCCGACCAGCGCGCTCGCCGGCG
CCTCCTTCCTCGTCGCGACCGACACGCTCGCTCGAGCGGGGCCGGCCGAAGTGCCGGTCGGGATCGTGACGGCCGCGCTG
GGGGCGCCCTTCTTCCTCTTCCTGCTCGTTCGACGGGAGGTGCACTCGGTATGA

Protein sequence : 
MPQPGRIISWTVALAALLVVVVVGSAMFGPVRIDAPTVARAILNRAGAGPYEVSAAHQAIVVDVRLPRIALAAVVGFALA
AAGTVMQGFFRNPLADPSIIGVSSGAAAGAVAAIAFPALVPFGSLHLAAFVGALATAFLVYAIATDGGRTPVATLLLAGV
AVQAFLGAVISYMLVHSGDSLREAVVWLMGHLHNSTWGDVRFALPFAVVGVLALCAFARDLNVLLLGEEDAHHLGVDVER
TKLLLLALASVVTAAGVAVAGVIGFVGLVVPHIMRLLVGPDHRILLPTSALAGASFLVATDTLARAGPAEVPVGIVTAAL
GAPFFLFLLVRREVHSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 9e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halxa_3347 YP_004597838.1 ABC transporter integral membrane protein BAC0163 Protein 6e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halxa_3347 YP_004597838.1 ABC transporter integral membrane protein VFG0922 Protein 3e-22 43
Halxa_3347 YP_004597838.1 ABC transporter integral membrane protein VFG1043 Protein 5e-15 41