Gene Information

Name : Halxa_2380 (Halxa_2380)
Accession : YP_004596878.1
Strain : Halopiger xanaduensis SH-6
Genome accession: NC_015666
Putative virulence/resistance : Unknown
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1702749 - 1704044 bp
Length : 1296 bp
Strand : +
Note : TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: htu:Htur_2781 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal

DNA sequence :
ATGAACGTCTCTATTATCGGCAGCGGCTACGTCGGGACCACCGTCGCCGCCTGCCTCGCCGATCTGGGCCACGAGGTCGT
CAACGTCGAAATCGACGAGGACATCGTCGACGCGATCAACGCCGGCGAAGCGCCGATCCACGAGTCGGGCCTCGAGGAGC
GGATCGCCGAACACGCCGGCACAGCCCTCCGCGCGACGACGGACTACGACGAGGTTCTCGACACCGATGTCACGCTGCTC
TGTCTCCCCACCCCGCAATCGGACGACGGCAGCCTCGATCTCGCGCCGATGCGCGCCGGCGCCGAGATGCTCGGCGATGC
GCTCGCCGTCAAAGACGACGACCACCTCGTCGTCGTCAAAAGCACCGTGCTGCCGGGAACGACCGAAGAGGTCGTCGCGC
CGATCCTCGAGGAGCAGTCGGGAACGGCCATCGGCGACGGCATCGACGTCGCGATGAACCCCGAGTTCCTGCGGATGGGG
ACCGCGGTGCAGGACTTCCTCGAGCCGGACAAGGTCGTCCTCGGAACCCGCACCGATGCAGCCGCCGAACAGCTTCGCGA
CCTCTACGCCCCCATCTTAGAAAACGACAGCACCCACCTCGTCGAGACCGACGTCCGCGAGGCCGAACTGATCAAGTACG
CGAACAACGCCTTCCTCGCCTCGAAGGTGTCGCTGGTGAACGACCTCGGCAACATCGCCAAGGAGTACGGCGCGGACGCC
TACGAGGTCCTCGAGGCGGTCGGCCTCGACGACCGCATCTCCGAGCGATTCATGCGCTCGGGACTGGGCTGGGGCGGCTC
CTGCTTCCCGAAGGACGTCGCTGCCCTGCGGGCCGGCGCCCGTGAGCAGGGGTACGAGCCCGAACTACTCGACGCCGCCG
TCGCCGTCAACGACGAGCAGCCGCGGCGGCTCGTCGACCTGCTCGCGGACCACGTCGACCTCGAGGGCGCGCGGATCGCC
GTCCTCGGTCTCTCGTTCAAGCCGGGAACCGACGACATCCGCAAGTCCCGCGCGCTGGACGTCGTCGAGTACCTCCGCGA
GCGCGGTGCTGCGGTCGTCGCGTACGACCCCGTCGCGGTGGACAACGTCCGCGAGCAGTATCCCGACCTCGAGATCGAGT
ACGCCGACTCGGCCGCGAGCGCGCTCGAGGGCGCCAATGGGGCAGTCGTCGCGACCGACTGGCCCGAGTTCGACGACCTC
ACGTTTGACGGGATGGCCAAACGGGTGCTCGTCGACGGGCGGCGGATCGACATCGACGAGGAGGAACTCGAGGTGTACGA
AGGACTGACCTGGTAA

Protein sequence :
MNVSIIGSGYVGTTVAACLADLGHEVVNVEIDEDIVDAINAGEAPIHESGLEERIAEHAGTALRATTDYDEVLDTDVTLL
CLPTPQSDDGSLDLAPMRAGAEMLGDALAVKDDDHLVVVKSTVLPGTTEEVVAPILEEQSGTAIGDGIDVAMNPEFLRMG
TAVQDFLEPDKVVLGTRTDAAAEQLRDLYAPILENDSTHLVETDVREAELIKYANNAFLASKVSLVNDLGNIAKEYGADA
YEVLEAVGLDDRISERFMRSGLGWGGSCFPKDVAALRAGAREQGYEPELLDAAVAVNDEQPRRLVDLLADHVDLEGARIA
VLGLSFKPGTDDIRKSRALDVVEYLRERGAAVVAYDPVAVDNVREQYPDLEIEYADSAASALEGANGAVVATDWPEFDDL
TFDGMAKRVLVDGRRIDIDEEELEVYEGLTW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 4e-40 41
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 4e-40 41
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 4e-40 41