Gene Information

Name : EAE_02600 (EAE_02600)
Accession : YP_004590734.1
Strain : Enterobacter aerogenes KCTC 2190
Genome accession: NC_015663
Putative virulence/resistance : Virulence
Product : putative fimbrial usher protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3188
EC number : -
Position : 551906 - 554377 bp
Length : 2472 bp
Strand : -
Note : COG3188 P pilus assembly protein, porin PapC

DNA sequence :
ATGATCACGCTGAAAACAGATAAAAAACGTCTGGCGCTATTTATTGTTCTGGTCTGCGCCGCTTCATGGGCTGAAGCGGA
TGAGGCTATTGAATTTAATACCGACGTACTGGATGCCAGCGACAGGCATAATGTCGATTTACAGCGTTTTTCCGAAGGCA
ACTTTGTGGCTCCCGGAGAATATCTGCTGGATGTTCGAATTAACAGCCAGGAGATTCCTCAGCAGACAATCCGTTATATC
GCCGATCCGGCCAATTCACATAAATCTATAGCGTGCCTGACGGCGCAACAACTTGAGTTACTGGCGCTCAAAGAAGAGGC
GCTGACCCATATTCATCCCATTAGCGCAACCTGCTATGACATTTCCCACCTTCCGGGTGTGGCGCTGAATAATAGCGCAG
GCGTACTGGACATTACCGTGCCTCAGGCATGGATGAAATATACCGACCCAGACTGGACGCCGCCTGAGCGCTGGGATAAC
GGCGTCGCCGGGCTGATTTTTGACTACAGCATTTCAGGGCAGGCCACGCATTACGAACAGGGTGGCGATCACTATCGCTC
TCTGTCCGGCTATGGGCAGACAGGTTTTAACCTCGGCGCATGGCGTTTTCGTGGCCAGTATCAGGCCAATTACACTTCAG
ATGATAATCATGGGCGTATCGACTGGGATCAGATCTATGCATATCGCCCGTTACCGATGCAGGCTGCAAAACTGACGGTC
GGCGAAATCTATTTGAATTCTCAGGTTTTTGATTCGGTGCGCTTCACCGGGGTCAACCTCGCCAGCGATGAGCGTATGCT
GCCGCCAAATTTGCAGGGCTACGCGCCTGAAGTGCACGGCATCGCCCGCAGTAATGCGAAGGTCACCGTCAGTCAGCAGG
GGCGTGTTATCTATCAAACCACCGTCCCTGCGGGGCCGTTTAATATTCAGGATCTGCACGGTTCGGTACGCGGTACGTTG
GATGTGCGCGTCGAAGAGCAGGATGGCAGCGTACAAACTTTCCAGGTCAATACGGCTGATATCCCTTATCTGACGCGTCC
GGGCTATGTTCGCTACAACGCCGCGGTTGGTAAGCCGTCGCGTTATAACCACGACGTTCAGGGCCCTGCGTTTTATAGCG
GCGATTTTTCCTGGGGGGTGAGCAATGCATGGTCACTGTACGGCGGCGCGTTGCTCACCGGCGAGCGCTACAACGCCTGG
TCGATGGGGATAGGACGGGATTTAAACTGGCTGGGAGCGCTGTCGGCCGATGCGACGCAATCCGTGAGTCGGGTGAAGCA
TCAGGCTGAACAAAAAGGCATGTCCTTTAAGCTCAGCTACGCCAAAACCTTTGATGAGTACAACAGCGCGATTACCTTTG
CCGGATACCGCTTTTCACAGCGAACCTTTCGCACCTTCTCGCAGTTTCTCGACGAGCAGTATGAAAGTAACAACAGCGCC
GGCAACGAAAAAGAGATGTACACCGTTACCGGCAACAAAACCTTTTTTGCTGACGATCCGCATTTAGCGACCACGTTATA
CCTCACCTATACCCACCAGAACTATTGGGATCGCGGTTCCCAGGATCGTTACGGATTATCGATGGGACACAGTTTTTCCT
TCGCGGGAATCCAGGGGATCAGCACCAACCTCGCGGCTTATCGCTCTGAGTATCAGGGCAAACGGGACGACAGTCTTTCG
CTTTCAATTTCAGTGCCATGGGGCGATGGCCGCTCTATGGATTATGAATTACAGAACAGCGGTAACCAGACCAGTCAAAT
GGTTTCGTATTCCGATAACCGCGATCGTAACAATCCGTGGCGTTTGCGCGCAGGGGTTTCCGGTGAAGGGCATACGGCAT
TTGATGGCTATTACCAGCATCGCAGCATGATGGCGGAACTGGAATCTAACGTCAGCTGGCAGCAATCACGCTATTTCTCC
GTTGGCGGCACGGTACGCGGCGGCTTTACGGCGACGCGTCACGGCGCGGCGCTACATAACAGTCAGGCGTCAATGAATAC
CGCCAGAGTGATGGTTGATACCGATGGCGTTGCCAATGTGCCGCTTAACGGTGAACAGGCGCATTCAAATCGTTTCGGTA
TTGCCGTTGTACCGGACGTCGTCAGTTATCACAGCTTTGATACCCGTATCGATGTGGACGCCATGGACGAGGACATTTCC
GCGACCAAAGCGATCGTGACTAACACCCTGACGGAAGGCGCTATTGGCTACCAGCGCTTTGCCGTCGCGCAGGGGCAAAA
AATGATGGCACTGCTGCGCCTGAAGGATGGCTCGGTGCCGCCGTTTGGCGCCGAAGTGTTTAACGCCAACGGCGTCAGCG
TCGCCATGGTGATGGAAAACGGCATGGCCTGGATTGCGGGGGTGAATCCGTCCGAGCGTCTTTCCGTTGCCTGGGCTGGC
CGTGCGCAGTGTCACTTACAGGTGCCACAACAAATCAACCCGGAAGGTAACGTGCTGTTGCCTTGTGAATAA

Protein sequence :
MITLKTDKKRLALFIVLVCAASWAEADEAIEFNTDVLDASDRHNVDLQRFSEGNFVAPGEYLLDVRINSQEIPQQTIRYI
ADPANSHKSIACLTAQQLELLALKEEALTHIHPISATCYDISHLPGVALNNSAGVLDITVPQAWMKYTDPDWTPPERWDN
GVAGLIFDYSISGQATHYEQGGDHYRSLSGYGQTGFNLGAWRFRGQYQANYTSDDNHGRIDWDQIYAYRPLPMQAAKLTV
GEIYLNSQVFDSVRFTGVNLASDERMLPPNLQGYAPEVHGIARSNAKVTVSQQGRVIYQTTVPAGPFNIQDLHGSVRGTL
DVRVEEQDGSVQTFQVNTADIPYLTRPGYVRYNAAVGKPSRYNHDVQGPAFYSGDFSWGVSNAWSLYGGALLTGERYNAW
SMGIGRDLNWLGALSADATQSVSRVKHQAEQKGMSFKLSYAKTFDEYNSAITFAGYRFSQRTFRTFSQFLDEQYESNNSA
GNEKEMYTVTGNKTFFADDPHLATTLYLTYTHQNYWDRGSQDRYGLSMGHSFSFAGIQGISTNLAAYRSEYQGKRDDSLS
LSISVPWGDGRSMDYELQNSGNQTSQMVSYSDNRDRNNPWRLRAGVSGEGHTAFDGYYQHRSMMAELESNVSWQQSRYFS
VGGTVRGGFTATRHGAALHNSQASMNTARVMVDTDGVANVPLNGEQAHSNRFGIAVVPDVVSYHSFDTRIDVDAMDEDIS
ATKAIVTNTLTEGAIGYQRFAVAQGQKMMALLRLKDGSVPPFGAEVFNANGVSVAMVMENGMAWIAGVNPSERLSVAWAG
RAQCHLQVPQQINPEGNVLLPCE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfC CAD42029.1 PrfC protein Virulence PAI II 536 Protein 1e-154 45
papC YP_854254.1 outer membrane usher protein PapC Virulence PAI I APEC-O1 Protein 3e-153 45
papC AAZ04424.1 outer membrane usher protein Virulence PAI I APEC-O1 Protein 2e-153 45
papC NP_755465.1 PapC protein Virulence PAI I CFT073 Protein 3e-154 45
papC_2 NP_757034.1 PapC protein Virulence PAI II CFT073 Protein 5e-154 45
papC YP_002414015.1 Outer membrane usher protein PapC Not tested Not named Protein 3e-154 45
pixC CAE85159.1 PixC protein Not tested PAI V 536 Protein 2e-157 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAE_02600 YP_004590734.1 putative fimbrial usher protein VFG1548 Protein 8e-155 45
EAE_02600 YP_004590734.1 putative fimbrial usher protein VFG0884 Protein 1e-154 45
EAE_02600 YP_004590734.1 putative fimbrial usher protein VFG0895 Protein 2e-154 45