Gene Information

Name : EAE_00190 (EAE_00190)
Accession : YP_004590256.1
Strain : Enterobacter aerogenes KCTC 2190
Genome accession: NC_015663
Putative virulence/resistance : Virulence
Product : DNA repair protein RadC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 32526 - 33002 bp
Length : 477 bp
Strand : +
Note : COG2003 DNA repair proteins

DNA sequence : 
ATGACTGGCGAATTAACAGCGTCACCGGCAGTGCCGGTGACAACCCGTCGTACGGTTCAGCGTGCACTCTCATTACTGGA
GAAACATCTTCGTGAGCCGGGTGCATTGTTTACGTCCACTGCGGCGGTTCGAGACTGGCTGCGTCTGAAAATGACCGGCC
TGGAGCGCGAGGTATTTATAGTGCTGTACCTGGATAACCAGCACCGTCTGCTGGAATGCGAAACACTGTTCAGCGGTACC
ATTAACAGTACGGAGGTGCATCCACGTGAGGTGGTGAAATCGGCCCTGCGCCATAACGCGGCAGCCGTGCTTCTGGCACA
CAACCATCCTTCCGGCGAAGCGGAGCCCAGCCTGGCTGACAAGCAGATTACCGACAGACTGATGAAGGCACTGTCGCTGG
TTGAAGTCAGGGTGCTGGACCACTGCATTGTCGGGGGGATGACGGTGAGTTCATTTGCAGAACGTGGCTGGCTATAA

Protein sequence : 
MTGELTASPAVPVTTRRTVQRALSLLEKHLREPGALFTSTAAVRDWLRLKMTGLEREVFIVLYLDNQHRLLECETLFSGT
INSTEVHPREVVKSALRHNAAAVLLAHNHPSGEAEPSLADKQITDRLMKALSLVEVRVLDHCIVGGMTVSSFAERGWL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 6e-34 67
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 4e-33 66
yeeS NP_838484.1 RADC family DNA repair protein Not tested SHI-1 Protein 4e-33 66
yeeS NP_708770.1 RADC family DNA repair protein Not tested SHI-1 Protein 4e-33 66
unnamed AAL67345.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-33 66
unnamed AAL08475.1 unknown Not tested SRL Protein 3e-33 66
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 1e-33 63
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 3e-34 63
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 4e-34 63
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 4e-34 63
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 6e-33 62
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 2e-33 62
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 4e-33 62
yeeS ADD91702.1 YeeS Not tested PAI-I AL862 Protein 3e-33 62
yeeS CAE85201.1 YeeS protein Not tested PAI V 536 Protein 3e-33 62
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 2e-33 62
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 4e-33 62
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 1e-31 61
aec73 AAW51756.1 Aec73 Not tested AGI-3 Protein 4e-33 61
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 1e-26 55
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 1e-26 55
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 9e-24 55
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 8e-27 55
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 4e-23 50
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 4e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAE_00190 YP_004590256.1 DNA repair protein RadC VFG1678 Protein 2e-34 67
EAE_00190 YP_004590256.1 DNA repair protein RadC VFG0660 Protein 1e-33 66
EAE_00190 YP_004590256.1 DNA repair protein RadC VFG1066 Protein 1e-33 66
EAE_00190 YP_004590256.1 DNA repair protein RadC VFG1617 Protein 9e-34 62
EAE_00190 YP_004590256.1 DNA repair protein RadC VFG1528 Protein 2e-33 62
EAE_00190 YP_004590256.1 DNA repair protein RadC VFG1119 Protein 4e-27 55