Gene Information

Name : ribD (EAE_12540)
Accession : YP_004592701.1
Strain : Enterobacter aerogenes KCTC 2190
Genome accession: NC_015663
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2689656 - 2690759 bp
Length : 1104 bp
Strand : +
Note : COG0117 Pyrimidine deaminase

DNA sequence :
ATGCAGGACGAAATGTACATGGCGCGAGCGCTGAAGCTTGCCGCGCGCGGACGCTTTACTACCCATCCTAATCCCAACGT
CGGCTGTGTGATTGTAAAAGACGGCGAGATCGTCGGCGAGGGTTTCCACTATCGGGCCGGCGAGCCGCACGCCGAAGTGC
ACGCGCTGCGTATGGCCGGCGATAAAGCCAAAGGCGCGACCGCCTACGTCACCCTGGAGCCCTGTAGCCACCATGGTCGC
ACGCCGCCGTGCTGCGACGCGCTGATCGCCGCAGGCGTGGCTCGCGTGGTAGCGGCAATGCAGGACCCGAATCCACAGGT
GGCCGGTCGCGGCCTGTACCGCCTGCAGCAGGCCGGCATTGACGTCAGCCATGGGCTGATGATGAATGAAGCGGAAGCGC
TGAATAAAGGTTTTCTCAAGCGGATGCGCACCGGTTTTCCGTGGATCCAGCTGAAGATGGGCGCTTCGCTTGATGGCCGT
ACGGCGATGGCCAGCGGTGAAAGTCAGTGGATCACCTCGCCACAGGCGCGACGCGACGTGCAGCGCCTGCGCGCGCAGAG
CCACGCTATTCTCACCAGCAGCGCGACCGTGCTGGCGGACGATCCGGCGCTGACCGTGCGCTGGCAGGAGCTGAGCGCCG
ATACGCAGGCGCTCTATCCGCAGGAGAACCTGCGTCAGCCGCTGCGTATCGTCATCGATAGCCAAAACCGCGTCACGCCG
GAGCATCGAATTATCCAGCAGCAAGGTGAAACCCTGTTCGCTCGCACCCATGCCGATGAACGTGCCTGGCCTGACAACGT
GCGTACCCTACTGGTGCCGGAGCATAACGGCCATCTCGACCTCGTGTTGCTAATGATGCAGCTCGGTAAACAGCAGGTGA
ACAGCATTTGGGTGGAAGCGGGGCCGACGCTGGCCGGCGCTTTGCTACAGGCCGGGCTGGTGGATGAGCTTATCGTCTAT
ATTGCGCCTAAACTGTTAGGCAGTGACGCGCGCGGTTTATGCGCGCTGCCGGGGCTTGAGAAACTGAGCCAGGCCCCCCA
TTTCAAATTCAACGAGATACGTCAGGTCGGGCCCGATGTCTGCCTGCATTTAACGACTGCGTGA

Protein sequence :
MQDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGDKAKGATAYVTLEPCSHHGR
TPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGLMMNEAEALNKGFLKRMRTGFPWIQLKMGASLDGR
TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPQENLRQPLRIVIDSQNRVTP
EHRIIQQQGETLFARTHADERAWPDNVRTLLVPEHNGHLDLVLLMMQLGKQQVNSIWVEAGPTLAGALLQAGLVDELIVY
IAPKLLGSDARGLCALPGLEKLSQAPHFKFNEIRQVGPDVCLHLTTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 5e-63 46
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 5e-63 46