Gene Information

Name : EAE_11730 (EAE_11730)
Accession : YP_004592539.1
Strain : Enterobacter aerogenes KCTC 2190
Genome accession: NC_015663
Putative virulence/resistance : Virulence
Product : lysine decarboxylase LdcC
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1982
EC number : -
Position : 2523890 - 2526028 bp
Length : 2139 bp
Strand : +
Note : COG1982 Arginine/lysine/ornithine decarboxylases

DNA sequence :
GTGAATATCATCGCCATCATGGGGCCCCACGGCGTCTACCATAAAGACGAACCGATCAAAGAGCTGGAAGCCGCTCTGCA
GAAGCAAGGATTCCAGACTATCTGGCCGCAAAACAGCGCCGACCTGCTGCAGTTTATCGAGCACAACCCGCGTATCTGCG
GCGTGATCTTCGACTGGGACGAGTACAGCGTTGATTTATGCAGCGATATCAATCGCCTGAATGAATATCTCCCACTGTAT
GCTTTTATCAATACGCACTCGACGATGGACGTCAGCAGCCAGGACCTGCGCATGGCGCTATGGTTCTTTGAATATGCGCT
GGGGCTGGCGGAAGATATCGCTACTCGTATTCGTCAGTATACCAACGAGTATCTGGACAACATCACGCCGCCATTTACCA
AAGCGTTATTTAACTATGTGCAGGAGGGAAAATATACCTTTTGTACACCCGGACACATGGCGGGAACCGCCTATCAGAAA
AGCCCGGTCGGCTGCCTGTTTTATGATTTCTTCGGCGGTAATACGCTGAAAGCCGATGTTTCTATCTCTGTTACCGAACT
GGGGTCGCTGCTGGACCATACCGGCCCGCATCTGGAAGCGGAAGAGTATATCGCTCGCGCCTTTGGCGCCGAGCAGAGCT
ACATGGTGACCAACGGCACCTCGACGTCGAATAAAATTGTCGGCATGTATTCGGCGCCCGCTGGCAGTACGTTGCTGATC
GACCGTAACTGCCATAAATCGCTGGCGCATCTGTTGATGATGAGCGATATCGTGCCGCTGTGGTTAAAACCGACGCGTAA
CGCGCTGGGGATCCTCGGCGGCATTCCGAAACGGGAATTTACCCGCGATAGCGTCCAGCACAAAGTAGAGACAACTCGCG
GCGCGCAGTGGCCGGTGCATGCGGTGATCACCAACTCCACCTATGACGGGCTGTTGTATAACACCACCTGGATTAAACAG
ACCCTTGACGTGCCGTCGATCCACTTCGATTCCGCCTGGGTGCCTTATACCCACTTTCACCCGATTTATCAGGGGAAAAG
CGGCATGAGCGGCGATCGCGTACCGGGGAAAGTGATCTTCGAAACCCAGTCGACGCATAAAATGCTGGCGGCGTTGTCGC
AGGCTTCGTTGATCCATATTAAAGGCAGCTACGATGAAGATACCTTCAATGAAGCCTTTATGATGCATACCTCTACCTCA
CCGAGCTATCCGATCGTCGCCTCGATAGAAACCGCAGCGGCGATGCTGCGCGGCAACTCCGGAAAACGCCTGATTCAGCG
CTCCATCGAACGCGCGCTACATTTCCGTAAGGAGGTGCAGCGCTTGCGTGAGGAGGCCGACGGCTGGTTCTTTGATATCT
GGCAACCGGAGGAGGTCGACGAAGCGCAATGCTGGCCAGTTTCCCCAGGAGAAGCGTGGCACGGATTCCAGGATGCCGAT
GACGACCATATGTTCCTCGATCCAGTAAAAGTCACCATTCTCACGCCGGGTATGGACGAGCAGGGCAATATGGCGGAAGA
GGGGATCCCGGCCGCGCTGGTGGCCAAATTCCTCGACGAGCGCGGCGTGGTGGTGGAGAAAACCGGGCCTTACAATCTGC
TGTTCTTGTTCAGTATCGGTATCGATAAAACCCGGGCGATGGGCCTGCTGCGCGGTCTGACCGAGTTTAAACGCGCCTAC
GATCTCAACCTGAGGGTGAAAAATATGTTGCCGGATCTCTATGCTGAGGATCCTGACTTCTACCGCAATATGCGCATCCA
GGATTTGGCGCAGGGGATCCACCGCCTGATCCGTCAGCATCAGCTCTCACAGCTGATGCTGCGGGCGTTCGACGTGCTGC
CGGAGATGAAAATGACCCCGCATCAGGCCTGGCAGCGGCAGATTAAGGGCGAAGTCGAAACCATCGAACTGGAGAATCTG
GTGGGGCGTATTTCGGCAAACATGATCCTGCCGTATCCGCCTGGCGTGCCGCTACTGATGCCGGGGGAGATGATCACCGA
AGAGAGTCGCGCGGTGCTCGATTTCCTGTTGATGCTCTGTTCGATCGGTCGCCACTATCCAGGTTTTGAAACCGACATCC
ATGGGGCCAAACGTGATGAAGACGGCGTCTACCGTGTACGAGTCTTAAAAAATAATTAG

Protein sequence :
MNIIAIMGPHGVYHKDEPIKELEAALQKQGFQTIWPQNSADLLQFIEHNPRICGVIFDWDEYSVDLCSDINRLNEYLPLY
AFINTHSTMDVSSQDLRMALWFFEYALGLAEDIATRIRQYTNEYLDNITPPFTKALFNYVQEGKYTFCTPGHMAGTAYQK
SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARAFGAEQSYMVTNGTSTSNKIVGMYSAPAGSTLLI
DRNCHKSLAHLLMMSDIVPLWLKPTRNALGILGGIPKREFTRDSVQHKVETTRGAQWPVHAVITNSTYDGLLYNTTWIKQ
TLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGDRVPGKVIFETQSTHKMLAALSQASLIHIKGSYDEDTFNEAFMMHTSTS
PSYPIVASIETAAAMLRGNSGKRLIQRSIERALHFRKEVQRLREEADGWFFDIWQPEEVDEAQCWPVSPGEAWHGFQDAD
DDHMFLDPVKVTILTPGMDEQGNMAEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLTEFKRAY
DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHRLIRQHQLSQLMLRAFDVLPEMKMTPHQAWQRQIKGEVETIELENL
VGRISANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIGRHYPGFETDIHGAKRDEDGVYRVRVLKNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 70
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAE_11730 YP_004592539.1 lysine decarboxylase LdcC VFG1670 Protein 0.0 63