Gene Information

Name : fliI (BCTU_045)
Accession : YP_004589897.1
Strain : Buchnera aphidicola host: Cinara tujafilina
Genome accession: NC_015662
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 54509 - 55876 bp
Length : 1368 bp
Strand : +
Note : FliI

DNA sequence : 
ATGTGTAAAAAAAATAAATGGGTTGATAAATTAAATAATATTGAAAAAAAAATTAATGTTGTGTCTAATTTTATTATTAT
TGGTTATATTATAAGTGCAAATAATTTTTTAATTGAAGCAACAGGTATTAGATTACCTATTGGAAAATTTTGTTTTGTTG
AAAATAATGATTTTAGCAAGATTCCTAAAATTATTTGTAAAATTATTGGTTTTTCTAAAAAAAAAATTTTTTTAATGCCG
CTTTATTCTATGAGAGGTATATTCCCGGGAGCTAAAGTATATACATATTCTTTATTAAATAGTGATACATTATTTTCTGA
TAAATTACCTTTTTCTTATCAATTGCTAGGTCGTGTACTTGATAGTTTTGGTTTTCCTTTAGATGGTTTTAATAAAATTA
ATACAAATGATTATCGAACTATACATTCAAATCCAGTAAATCCTTTAAATCGGGCGCCTATTAAAGAAATTTTTGATACC
GGTGTGTGTTCAATTAATAGTTTATTAACAATGGGTAGAGGACAAAGAATTGGGATTTTTGCAAGAGCTGGTGTAGGTAA
AAGTATGTTGTTAGGGATGATAGCACGACATTCTAAAGTAGATATTATTATCATTACATTAGTAGGAGAAAGAGGAAGAG
AAGTCAATGAATTTATTAACAATATATTAGGTCCTGATAGTCTTAAAAAATCAGTTGTAATTGTTTCTTCAGCCGGGACT
TCTCCTTTATTTAGAGTTCAAGCGGTACAATATGCTACGTCTATAGCGGAGTATTTTTGTGAAAAAAATAATAATGTTTT
ATTAATTGTAGATTCATTAACTCGGTATGCAATGGCATATAGAGAAATTTCATTGTCTATTAATGAAATACCTATAGCTA
AAGGATATCCGGCCTCTATTTTTTCTAATATTCCACAATTAATTGAAAGAACGGGTAATATCTCTAAAAATTTCGGTTCT
ATTACTGCTATTTATACTGTTCTTACAGAAGGTGATGAATTTAATGATCCGGTTTTAGATATAGCAAAATCAATATTAGA
TGGGCATATTTTTTTATCTAATGAATTAGCAGATTCGGGACATTATCCTGCAATAGATATTCAAAAATCTATTAGTAGAG
TAATGACATCAATTATTTGCTCTCAACATAAAAAAAGTTCTAGTTATATTAAAAAATTAATTTCATGTTATTTATCACAT
AAAGAATTAATCGATTTAGGAGCTTATAGTATAGGAACTAATCATTTTTTAGATATAGCAATAAAAATTTGGCCAATATT
GAATAAATTTCTTCAACAGGATTTTTTGGAACATTGTTCATACCAATATTCTCTTGAAAAATTAGAAGATTTATTAAAAA
ATATCTAA

Protein sequence : 
MCKKNKWVDKLNNIEKKINVVSNFIIIGYIISANNFLIEATGIRLPIGKFCFVENNDFSKIPKIICKIIGFSKKKIFLMP
LYSMRGIFPGAKVYTYSLLNSDTLFSDKLPFSYQLLGRVLDSFGFPLDGFNKINTNDYRTIHSNPVNPLNRAPIKEIFDT
GVCSINSLLTMGRGQRIGIFARAGVGKSMLLGMIARHSKVDIIIITLVGERGREVNEFINNILGPDSLKKSVVIVSSAGT
SPLFRVQAVQYATSIAEYFCEKNNNVLLIVDSLTRYAMAYREISLSINEIPIAKGYPASIFSNIPQLIERTGNISKNFGS
ITAIYTVLTEGDEFNDPVLDIAKSILDGHIFLSNELADSGHYPAIDIQKSISRVMTSIICSQHKKSSSYIKKLISCYLSH
KELIDLGAYSIGTNHFLDIAIKIWPILNKFLQQDFLEHCSYQYSLEKLEDLLKNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-61 43
escN AAC31513.1 L0034 Virulence LEE Protein 1e-61 43
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-61 43
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-61 43
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-61 43
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-59 43
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-61 43
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-61 43
escN AAC38383.1 EscN Virulence LEE Protein 1e-61 43
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-65 42
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-65 42
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-61 42
escN AAK26715.1 EscN Virulence LEE Protein 3e-61 42
escN AAL57542.1 EscN Virulence LEE Protein 3e-61 42
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 5e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_004589897.1 flagellum-specific ATP synthase VFG2331 Protein 5e-100 48
fliI YP_004589897.1 flagellum-specific ATP synthase VFG2499 Protein 9e-98 46
fliI YP_004589897.1 flagellum-specific ATP synthase VFG1254 Protein 1e-91 45
fliI YP_004589897.1 flagellum-specific ATP synthase VFG0812 Protein 6e-62 43
fliI YP_004589897.1 flagellum-specific ATP synthase VFG0730 Protein 7e-62 43
fliI YP_004589897.1 flagellum-specific ATP synthase VFG2144 Protein 6e-74 41