Gene Information

Name : dnaB (BCTU_370)
Accession : YP_004590193.1
Strain : Buchnera aphidicola host: Cinara tujafilina
Genome accession: NC_015662
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 411559 - 412953 bp
Length : 1395 bp
Strand : +
Note : DnaB

DNA sequence :
ATGAAAGAAAAACTGTCTTATCAAGAAATATTCAATAAAACCCCTCCTCATTCTTTAGAAGCTGAGCAATCAGTATTAGG
GGGTTTAATGTTAGATAATCAACAATGGGATACGGTATCTGAATATATCGTAAAAGAAGATTTTTTCAACCAACAACATC
AAATAATTTTTTATGAAATGAAAAATTTAATAGAGCAAGGTAATCCAATAGATCTTATAACATTATCTGAATCATTAGAA
CAAAAAGGACAACTAAATAATATCGGACGATTTTCATATTTAGCTGAAATATCGAAAAATACACCAAGCGTAGCTAATAT
TGTTACTTATGCAGAAATTATTAGAGAAAGAGCAGTTACACGAGAAATTATCTTAGCTGCTCATAATATTGCTCACGCAG
GATATTATCCTAAAGGAAGAAAAAGTACCGAACTATTAAATTATGCTGAATCAAGTATTTTTAAAATATCAGAAATAAGA
ATGAATAAGAACGACGGACCAAAAAATATCGAAACTATTTTAGATACTACTATAACTTCTATTGAAAAAATTTTTAAAAA
ACCAAATAATGGCATAACTGGATTAAATACCGGTTATCATGATTTAAACAAAAAAACTACAGGATTACAAAAATCTGACC
TTATTATTATAGCAGCACGCCCATCAATGGGAAAAACTGCATTTGCAATGAATTTGTGTGAAAATATCGCGATGTTATAT
GAAAAACCAATTTTAATTTTTAGTTTAGAAATGCCAGCTGAACAAATTATGATTCGTATGTTAGCGTCATTATCACGAAT
TAATCAATCAAAAATCCGAACAGGAAAGTTAACCGATGAAGAATGGAGTCGTATTTCTGGTACTATTAATATTTTATTAA
AAAAGAAAAATATTTACATTGATGATTCGGCCGGATTAACATCTAATGAAATTCGAACTCGTGCACGCCGTATTTATAGA
GAAAATAATGGTTTAAGTTTGATAATGATTGATTATTTACAACTTATTACAACGCCAATATTATCAGGAAATCGTACTTT
AGAAATAGCTGATATTTCACGAACACTTAAATCATTAGCAAAAGAATTACATATTCCTATTATTGCTTTATCTCAACTAA
ATCGATCATTAGAACAACGATCAGACAAAAGACCTATTAATTCCGATTTACGAGAATCTGGTTCATTAGAACAAGATGCT
GATCTTGTAATATTTATTTATAGAGACGAACTCTATCATGAACAAAGCGAGTTAAAAGGTATTGCAGAAATTATTATCGG
AAAACAACGAAATGGACCAACCGGAACAATACGCTTAACATTTAATGGCCAGTGGTCACGATTTGATAATTATGCTCATC
CTAATGTTCATTTTAATTTTAATCACAATAATTAA

Protein sequence :
MKEKLSYQEIFNKTPPHSLEAEQSVLGGLMLDNQQWDTVSEYIVKEDFFNQQHQIIFYEMKNLIEQGNPIDLITLSESLE
QKGQLNNIGRFSYLAEISKNTPSVANIVTYAEIIRERAVTREIILAAHNIAHAGYYPKGRKSTELLNYAESSIFKISEIR
MNKNDGPKNIETILDTTITSIEKIFKKPNNGITGLNTGYHDLNKKTTGLQKSDLIIIAARPSMGKTAFAMNLCENIAMLY
EKPILIFSLEMPAEQIMIRMLASLSRINQSKIRTGKLTDEEWSRISGTINILLKKKNIYIDDSAGLTSNEIRTRARRIYR
ENNGLSLIMIDYLQLITTPILSGNRTLEIADISRTLKSLAKELHIPIIALSQLNRSLEQRSDKRPINSDLRESGSLEQDA
DLVIFIYRDELYHEQSELKGIAEIIIGKQRNGPTGTIRLTFNGQWSRFDNYAHPNVHFNFNHNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 5e-93 49
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-93 49
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 2e-90 49
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 8e-92 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-82 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-82 46
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-89 45
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-72 44
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-67 42